Nucleic Acids Research, Vol. 19, Supplement 2073

.=) 1991 Oxford Universily Press

Compilation of small RNA

sequences

Shashi Gupta and Ram Reddy Baylor College of Medicine, Pharmacology Department, Houston, TX 77030, USA

This is an update containing small RNA sequences published during 1990. Approximately two hundred small RNA sequences are available in this and earlier compilations. The hard copy print out of this set will be available directly from us (inquiries should be addressed to R. Reddy). These files will be available on GenBank computer in the near future. Sequences from various sources covered in earlier compilations (see Reddy, R. Nucl. Acids Res. 16:r71; and Reddy,R. and Gupta,S. Nucl Acids Res. 1990 Supplement, 18:2231) are not included in this update but are listed below. Supported by GM-38320. Ul RNA: Human; Mouse; Rat; Chicken; Frog (Xenopus laevis); Fruit fly (Drosophila melanogaster); Nematode (Caenorhabditis elegans); Slime mold (Physarum polysephalum); bean (Phaseolus vulgaris); Soybean (Glycine max); yeast (Saccharomyces cerivisiae); Tomato (Lycopersicon esculentum); Algae (Chlorella saccharophila). U2 RNA: Human; Mouse; Rat; Chicken; Frog (Xenopus laevis); Fruit fly (Drosophila melanogaster); Nematode (Caenorhabditis elegans); Slime mold (Physarum polysephalum); Amoeba (Dictyostelium discodeum); trypanosome (Trypanosome brucei); yeast (Saccharomyces cerivisiae); Yeast (Schizosaccharomyces pombe); Broad bean (Vicia fabe); maize (Zea mays); Pea (Pisum sativum); Crucifer (Arabidopsis thaliana). U3 RNA: Human; Mouse; Rat; Frog (Xenopus laevis); Fruit fly (Drosophila melanogaster); Amoeba (Dictyostelium discodeum); yeast (Saccharomyces cerivisiae); Yeast (Schizosaccharomyces pombe). U4 RNA: Human; Mouse; Rat; Chicken; Frog (Xenopus laevis); Fruit fly (Drosophila melanogaster); Slime mold (Physarum polysephalum); yeast (Saccharomyces cerivisiae); Nematode (Caenorhabditis elegans); Trypanosome (Trypanosome brucei); Broad bean (Vicia fabe). U5 RNA: Human; Mouse; Rat; Chicken; Frog (Xenopus laevis); Fruit fly (Drosophila melanogaster); Nematode (Caenorhabditis elegans); Dinoflagellates (Crypthecodinium cohnii); Amoeba

(Tetrahymena); Pea (Pisum sativum); yeast (Saccharomyces cerivisiae); Yeast (Schizosaccharomyces pombe); Crucifer (Arabidopsis thaliana). U6 RNA: Human; Mouse; Rat; Frog (Xenopus borealis); Fruit fly (Drosophila melanogaster); Nematode (Caenorhabditis elegans); Slime mold (Physarum micoplasmodia); Trypanosome (Trypanosome brucei); yeast (Saccharomyces cerivisiae); Yeast (Schizosaccharomyces pombe); Broad bean (Vicia fabe). U7 RNA: Human; Mouse; Sea urchin (Psammechinus miliaris). U8 RNA: Human, Mouse, Rat. Ull, U12, U13 RNAs: Human. 7SK RNA: Human, Rat. SNR 3, SNR5, SNR 8, SNR 9, SNR 128, SNR 190, SCRI: yeast (Saccharomyces cerivisiae). SRP (7SL) RNA: Human, Mouse, Rat, Frog (Xenopus laevis); Fruit fly (Drosophila melanogaster); Yeast (Schizosaccharomyces pombe and yarrowia); Wheat (Triticum sp.); maize (Zea mays); Bacteria (Halobacterium halobium).

RNaseP RNA: human; Bacteria (E. coli; B.subtilis); Yeast (Saccharomyces cerivisiae). MRP RNA: Human, Mouse, Rat. Telomerase RNA: Protozoa (Tetrahymena). CEH-RNA: chicken. tc-RNAs: Human, Chicken. B2 RNAs: Mouse, Hamster. PolyA+ RNA: mouse, Dinoflagellates (C. cohnii). YRNAs: Human. 4.5 S RNA: Mouse; Rat; Hamster; E. coli. 4.5SI RNA: Rat; Broad bean (Vicia fabe). 6S RNA: E.coli; P.aeruinosa. MIC RNA: E. coli. msdRNA: Stigmatella aurantica; Myxococcus xanthus; E. coli. Viral small RNAs: Adenovirus: VAI, VA2, CELO; Epsteinbarr Virus: EBER1, EBER2; Vesicular Stomatitis virus: VSV +, VSV-; Herpes Virus: HSUR1, HSUR2, HSUR3, HSUR4,HSUR5, HVP1,HVP2. Phage RNAs: QB phage: RQ120; 029 bacteriophage:029 RNA.

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