Functional and Biochemical Characterization of Cucumber Genes Encoding Two Copper ATPases CsHMA5.1 and CsHMA5.2.

JBC Papers in Press. Published on May 11, 2015 as Manuscript M114.618355 The latest version is at http://www.jbc.org/cgi/doi/10.1074/jbc.M114.618355 Characterization of copper ATPases CsHMA5.1 and CsHMA5.2 from cucumber

Functional and Biochemical Characterization of Cucumber Genes Encoding two Copper ATPases CsHMA5.1 and CsHMA5.2 Magdalena Migocka1, Ewelina Posyniak1, Ewa Maciaszczyk-Dziubińska2, Anna Papierniak1, Anna Kosieradzaka1 1

2

University of Wroclaw, Institute of Experimental Biology, Department of Plant Molecular Physiology, Kanonia 6/8, 50-328 Wroclaw, Poland

University of Wroclaw, Institute of Experimental Biology, Department of Genetics and Cell Physiology, Kanonia 6/8, 50-328 Wroclaw, Poland

To whom correspondence should be addressed: Magdalena Migocka, University of Wroclaw, Institute of Experimental Biology, Department of Plant Molecular Physiology, Kanonia 6/8, 50-328 Wroclaw, Poland, tel. +48 (71) 3754113, mail: [email protected] Keywords: vacuolar ATPases; metal homeostasis; copper transport; membrane transport; gene expression, P1B-ATPases showing different affinities to Cu+ (Km ~ 1 or 0.5 µM, respectively) and similar affinity to Ag+ (Km ~ 2.5 µM). Both proteins restore the growth of yeast mutants sensitive to copper excess and silver through intracellular copper sequestration, indicating that they contribute to copper and silver detoxification. Immunoblotting with specific antibodies revealed the presence of CsHMA5.1 and CsHMA5.2 in the tonoplast of cucumber cells. Interestingly, the root-specific CsHMA5.1 is not affected by Cu stress, whereas the widely expressed CsHMA5.2 is up-regulated or downregulated in roots upon copper excess or deficiency, respectively. The Cu-induced increase in tonoplast CsHMA5.2 is consistent with the increased activity of ATP-dependent Cu transport into tonoplast vesicles isolated from roots of plants grown under Cu excess. These data identify CsHMA5.1 and CsHMA5.2 as high-affinity Cu+ transporters and suggest that CsHMA5.2 is responsible for the increased sequestration of Cu in vacuoles of cucumber root cells under copper excess.

Background: Plant copper HMA5-like ATPases have not been biochemically characterized yet. Results: Cucumber copper ATPases CsHMA5.1 and CsHMA5.2 are tonoplast monovalent copper transporters differentially regulated by Cu availability. Conclusion: HMA5-like ATPases may contribute to vacuolar sequestration of copper excess in plant cells. Significance: Orthologous transporters are differently displayed to achieve organismal copper homeostasis. ABSTRACT Plant copper P1B-type ATPases appear to be crucial for maintaining copper homeostasis within plant cells, but until now they have been studied mostly in model plant systems. Here, we present the molecular and biochemical characterization of two cucumber copper ATPases, CsHMA5.1 and CsHMA5.2, indicating a different function for HMA5-like proteins in different plants. When expressed in yeast, CsHMA5.1 and CsHMA5.2 localize to the vacuolar membrane and are activated by monovalent copper or silver ions and cysteine,

Copper is a trace element essential for the activity of numerous oxidation-reduction enzyme systems, 1

Copyright 2015 by The American Society for Biochemistry and Molecular Biology, Inc.

Downloaded from http://www.jbc.org/ at NORTH DAKOTA STATE UNIV on June 18, 2015

*Running title: Characterization of copper ATPases CsHMA5.1 and CsHMA5.2 from cucumber

Characterization of copper ATPases CsHMA5.1 and CsHMA5.2 from cucumber shown to be involved in mobilization of Zn and Cu from plastids under zinc or copper deficiency or from the intracellular compartments of the mineral storage site of grains (aleurone cells) during grain filling and germination (10). In comparison, the P1B1 subgroup of plant P1B-ATPases includes proteins that are highly specific for monovalent Cu+ (11, 12). The first characterized plant HMA, AtHMA7 (RAN1), is a major component of the plant hormone ethylene signaling pathway since it delivers copper to the secretory pathway, to supply the formation of functional Cu-dependent ethylene receptors (13, 14). Chloroplast-localized HMA6 (PAA1) and HMA8 (PAA2) are responsible for the import of Cu to the chloroplasts, to provide the cofactor for copper-dependent activities: antioxidant enzyme Cu/Zn superoxide dismutase (Cu/ZnSOD) and plastocyanin, involved in photosynthesis (12, 15, 16). Contrary to AtHMA6AtHMA8, which deliver copper to the target proteins, AtHMA5 appears to be involved in detoxification of Arabidopsis roots from copper excess (17). A similar function has been recently reported for the homologous protein OsHMA5 in rice (18). The athma5 knock-out mutant is hypersensitive to copper, whereas rice knockout lines for OsHMA5 accumulated more copper in roots and less in shoots, when compared to wild type plants (17, 18). In addition, OsHMA5 was shown to be localized in the plasma membrane (18). These observations suggest that in plants HMA5 is involved in root-to-shoot translocation of copper and thus protects plant roots from Cu toxicity (17). In contrast to A. thaliana, rice possess two homologs of HMA5 proteins OsHMA5 and OsHMA4 (19); however, the function of the latter one is still unknown. Multiple orthologs of HMA5 proteins have also been found in other plants: four in the dicot plants Populus trichocarpa (PtHMA5.1, PtHMA5.2, PtHMA5.3 and PtHMA5.4) and Vitis vinifera (VvHMA5.1, VvHMA5.2, VvHMA5.3 and VvHMA5.4), and three in the monocot Sorghum bicolor (SbHMA5.1, SbHMA5.2, SbHMA5.3) and the lycophyte Selaginella moellendorffii (SmHMA5.1, SmHMA5.2, SmHMA5.3) (19). Some of the HMA5 isoforms are very closely related and close together on the same chromosomes (VvHMA5.1, VvHMA5.2 and VvHMA5.3; PtHMA5.1 and PtHMA5.3); hence they could have arisen as a 2


including Cu-Zn superoxide dismutase, cytochrome oxidase, uricase, tyrosinase, amine oxidase, lysyl oxidase, and ferroxidase. In plants, the crucial metabolic processes such as photosynthesis, respiration, hormone signaling and the response to redox perturbations require copper. However, only minute amounts of copper are available in the cells due to the high toxicity of copper excess (1). The critical components of the copper homeostasis mechanism in plants include membrane transporters responsible for the delivery of copper ions into different cellular compartments to supply Cu-dependent activities as well as for the rapid efflux or sequestration of toxic copper excess (2). Among the several families of heavy metal transporters that have been identified in plants, P1B-ATPases (heavy metal ATPases, HMAs) are proteins involved in the delivery of essential metals, including copper, to intracellular compartments or in the detoxification of plant cells from heavy metal excess (3–7). Based on previous studies on yeast, bacterial and human P1B-ATPases as well as on sequence comparisons, the family was divided into two groups: one including transporters of monovalent cations, Cu/Ag; and the second, transporting divalent cations, Cd/Pb/Zn/Co (3, 4). However, based on the conserved residues in transmembrane helices 6, 7, and 8, P1B-ATPases have been further classified into five subgroups designated as: PIB1, containing Cu+- and Ag+ATPases; PIB2, with Cd2+-, Zn2+-, and Pb2+ATPases; PIB3, with Cu+/Cu2+-ATPases; PIB4, including Co2+-ATPases; and PIB5, containing PIBtype ATPases of unknown specificity (5). In model dicot and monocot plants, Arabidopsis thaliana and Oryza sativa, eight (AtHMA1AtHMA8) and nine (OsHMA1-OsHMA9) P1BATPases have been identified. Based on the current knowledge, copper transport has been attributed to plant HMA1 (subgroup P1B4) and HMA5-8 (subgroup P1B1) P1B-ATPases. Members of the P1B4 subgroup include broad-specificity transporters of metals. Arabidopsis thaliana HMA1 was shown to be a Ca2+/heavy metal pump localized in the chloroplast envelope, which delivers copper from the cytosol into the chloroplast stroma and detoxifies chloroplasts from Zn2+ under Zn excess (8, 9). A similar protein from barley (Hordeum vulgaris), HvHMA1, was

Characterization of copper ATPases CsHMA5.1 and CsHMA5.2 from cucumber purchased from Euroscarf (Frankfurt, Germany). CsHMA5.1 and CsHMA5.2 sequences were retrieved from the genomic contigs of cucumbers Borszczagowski (ACYN01001706) and Chinese long (ACHR01006853) available in GenBank. For heterologous expression in the yeast, full-length CsHMA5.1 and CsHMA5.2 were amplified by PCR using primers introducing restriction sites (underlined) for XbaI (forward 5’-AAA TCT AGA GTT ATG TTG AAG TTA CCG CGG TG-3’) and SpeI (reverse 5’-TTT ACT AGT TTC AAC CAC TAT TCC ATT CAT TTG AAT-3’) for CsHMA5.1 and for XbaI (forward 5’-AAA TCT AGA ATG ACC TGC TCT GCT TGT G-3’) and SalI (reverse 5’ TTT GTC GAC CTC AAC TCT AAT GCC TTG TAT CTC A-3’) for CsHMA5.2 and ligated into XbaI/SpeI or XbaI/SalI opened pUG35 yeast expression vector for the 3′ GFP fusions (23). S. cerevisiae mutant strains were transformed with empty vector (pUG35) (negative control) or vectors carrying CsHMA5.1 or CsHMA5.2 using Yeast Transformation Kit (Sigma-Aldrich). For the drop test experiments, yeast cells cultures at an initial OD600 = 0.3 were serially diluted and spotted on standard complete minimal media without uracil, containing 2% (w/v) glucose (Gal), 2% (w/v) bacto-agar, 0.7% (w/v) yeast nitrogen base (YNB) and aminoacids without methionine (SC-U/Glu), supplemented or not (control) with 50 µM CuCl2 or 15 µM AgNO3. Plates were incubated at 30°C for 3 to 5 days. For Cu uptake, the liquid SC-U/Glu yeast culture (OD600 ~ 0.5) was supplied with 100 µM CuCl2 and subsampled after 1, 2, 4 and 8 hours of growth in the presence of metal excess. The intracellular copper content was determined essentially as described earlier (24, 25) using Atomic Absorption Spectrophotometer 3300 (Perkin Elmer).

EXPERIMENTAL PROCEDURES Plant material and growth conditions - Cucumber (Cucumis sativus var. Krak) plants were grown in hydroponics as described earlier (21). To induce Cu deficiency, following germination the seedlings were grown for two weeks in nutrient solutions completely deprived of copper. To impose copper toxicity, two-week old cucumber seedlings were transferred to the fresh nutrition media supplemented with 20 µM CuCl2 and grown for the next 72 hours.

Isolation of vacuolar membranes from yeast cells and plant roots - Exponentially growing yeast cells expressing CsHMA5.1 or CsHMA5.2 or transformed with empty vector (negative control) were used for vacuolar membranes preparation. At first, total microsomes were prepared according to previously described protocol (26). Subsequently, vacuolar membranes were separated from total membrane proteins through the ultracentrifugation in sucrose gradient essentially as described earlier (27). The presence of CsHMA5.1 and CsHMA5.2

Yeast expression, metal tolerance and accumulation - Saccharomyces cerevisiae strains: Δace1 (ACE1::kanMX4) and Δycf1 (YCF1::kanMX4), isogenic to BY4742 (MATα his3Δ1 leu2Δ0 lys2Δ0 ura3Δ0) (22) were 3


result of a gene duplication event (19). Since none of the identified duplicate genes has been studied yet, the relevance of these extra Cu-ATPases is not known. The recent screening of the cucumber genome revealed the presence of two genes encoding two putative proteins homologous to HMA5-like P1BATPase (20). Based on the homology to AtHMA5, the proteins were initially designated as CsHMA5A and CsHMA5B (20). To make the nomenclature of cucumber HMAs consistent with the annotation of the reported isoforms of other plant HMAs (19), we renamed CsHMA5A and CsHMA5B as CsHMA5.1 and CsHMA5.2, respectively. In this work, we investigated the function, regulation and biochemical properties of both cucumber HMA5-like pumps. Using yeast to produce the functional CsHMA5.1 and CsHMA5.2 proteins, we provide the first enzymatic characterization of HMA5-like copper ATPases in plants and show that CsHMA5.1 and CsHMA5.2 act as high-affinity vacuolar Cu+ transporters. In addition, we provide evidence for different regulation of the transcript and protein levels of CsHMA5.1 and CsHMA5.2 in roots under different availability of copper. Taken together, the data suggest different biological roles of cucumber CsHMA5.1 and CsHMA5.2 and reveal differences between the function of homologous HMA5 proteins from cucumber, rice and A. thaliana.

Characterization of copper ATPases CsHMA5.1 and CsHMA5.2 from cucumber

Assay for CsHMA5.1 and CsHMA5.2 ATPase activities in yeast vacuolar membranes - ATPase activity was measured as the rate of released inorganic phosphate as described by Ames (29). The reaction media contained 100 µg of vesicle protein, 5 mM Tris-MES (pH 7.6), 0.1 mM sodium azide, 0.5 mg mL-1 saponin, different concentrations of metals and 300 nmol bafilomycin to avoid the background resulting from the activity of vacuolar V-ATPase. 300 µM Na2SO3 or 1 mM BCS (Cu+-specific chelator) were included in the assay containing copper. Following 10 min-long incubation at room temperature, reactions were initiated by 30 mM Mg-ATP and carried out for 30 min at 30°C. The rate of Pi released due to HMA activity was calculated from the difference between the activity measured with or without specific P-ATPase inhibitor Na2VO4 (1 mM). The background hydrolytic activities measured in membranes prepared from yeast transformed with empty vector were subtracted from the results obtained in membranes containing cucumber CsHMA5.1 or CsHMA5.2.

Immunolocalization of CsHMA5.1 and CsHMA5.2 in yeast and cucumber cells - Polyclonal antiCsHMA5.1 and anti-CsHMA5.2 antibodies were raised in rabbit against the KLH-conjugated peptides ISKDGTDHRSREVC, corresponding to N-terminal amino acids 101-114 of CsHMA5.1 protein and TGSGRYKATIFPEGC, corresponding to N-terminal amino acids 202-215 of CsHMA5.2 protein (GenScript). The position of peptides is marked in Fig. 2A. In addition, commercially available antibodies (Agrisera) against marker enzymes for plasma membrane (PM H+-ATPase, AS07 260, diluted 1:10000 in PBS-T) and tonoplast (vacuolar pyrophosphatase PPase, AS12 1849, diluted 1:2000 in PBS-T) were used to determine membrane purity. Western blot analysis was performed essentially as described earlier (20), using 1: 1000 diluted antibodies for CsHMA5.1 or CsHMA5.2. Following incubation with the primary antibodies, the binding of antirabbit horseradish peroxidase (HRP)-conjugated secondary antibodies (diluted 1:3000 in PBS-T; AS09 602, Agrisera) was visualized using the enhanced chemiluminescence system (ECL; Amersham International).

Assay for CsHMA5.1 and CsHMA5.2 transport activities in vacuolar membranes isolated from yeast cells or plant roots - ATP-dependent copper transport was assayed in reaction media containing 5 mM Tris-MES (pH 7.6), 0.3 M sorbitol, 0.1 mM sodium azide, different concentrations of CuCl2, 4


300 µM Na2SO3 or 1 mM BCS and 300 nmol bafilomycin. The membranes (100 µg protein) were incubated with the reagents for 5 min at room temperature and then, 1 mM MgSO4 and 1 mM ATP were added to initiate ATPase-mediated transport of copper into tonoplast vesicles. After 5 min, tonoplast was filtered through nitrocellulose membrane (0.45 µm, Millipore) and washed with the copper-free buffer to remove metal unspecifically bound to the membranes. Following washing, 3M HCl was used to elute copper accumulated inside vesicles. Intravesicular copper content was determined using AAS 3300 (Perkin Elmer). HMA-dependent copper transport was calculated from the difference between the transport activity measured with or without Na2VO4 (1 mM). The background transport activities measured in membranes prepared from yeast transformed with empty vector were subtracted from the results obtained in membranes containing cucumber CsHMA5.1 or CsHMA5.2.

in yeast vacuole was confirmed by immunolocalization assay with specific antibodies raised against cucumber proteins and by using a fluorescence microscope (Axio Imager M1, Carl Zeiss) equipped with a 100× oil immersion objective. For visualization of yeast vacuolar membranes, cells were labeled for 20 min at 30 °C in 6.4 µM FM4-64 (Molecular Probes, Eugene, OR) in (SC-U/Glu) medium. Following washing with water, cells were further cultured in (SCU/Glu) medium or for 30 min. The roots (30 g) from two-week old cucumber plants growing under different Cu availability were harvested for the preparation of tonoplast and other membrane enriched fractions, essentially as described earlier (20, 21). Protein content was estimated according to Bradford (1976) (28), with BSA as a standard.

Characterization of copper ATPases CsHMA5.1 and CsHMA5.2 from cucumber determined by TMHMM Server2.0 and visualized using TMRPres2D software. Multialignment and homology estimation between cucumber HMA sequences was performed using ClustalW. The phylogenetic tree of plant HMA5-8 proteins was constructed using MEGA6.0 software (32) and the Maximum Likelihood method with the bootstrap (1000 replicates). The sequences from Arabidopsis thaliana and Oryza sativa were retrieved from TAIR and TIGR databases, respectively. The previously annotated (19) sequences from Chlamydomonas reinhardtii, Physcomitrella patens, Populus trichocarpa, Sorghum bicolor, Selaginella moellendorffii and Vitis vinifera were retrieved from customized databases (GenBank, TAIR, Phytozome v9.1). The PCR amplified CsHMA5.1 and CsHMA5.2 sequences have been submitted to the GenBank data library and are available under accession numbers KJ818254 and KJ818255. Statistical analysis - Each experiment was repeated three to six times using material prepared from different plants or yeast cultures. Values are expressed as means ± SD. Data were analyzed using one-way ANOVA followed by Tukey’s test. Statistical analysis of the data was performed using paired or unpaired Student’s t-test; significance was accepted when P < 0.05. The data from ATPase activity assay and metal transport assay were fitted to the Michaelis-Menten equation using GraphPad Prism software (GraphPad Software, Inc). Results Sequence analysis of cucumber CsHMA5s – The two genes coding for HMA5-like proteins in cucumber are located on different chromosomes of the cucumber Chinese long genome. CsHMA5.1, which is more closely related to AtHMA5, was found on chromosome 5 (ACHR02000005.1), whereas CsHMA5.2 is located on chromosome 4 (ACHR02000004.1). HMA5s are not the only plant Cu+ ATPases that have been multiplied. The genes encoding HMA6s and HMA7s are also present in multiple copies in some plants, but the number of their copies is lower when compared to HMA5s (Fig. 1). Phylogenetic analysis of plant

Sequence Analyses - The hydropathy profile and location of putative transmembrane helices was 5


sRT-PCR and real-time PCR - Total RNA were extracted from various cucumber organs with TRIReagent (Sigma-Aldrich). Reverse transcription was carried out as previously described (30). Semiquantitative RT-PCR (sRT-PCR) and quantitative PCR (qPCR) experiments were performed according to previously reported procedures (31). The primers used to analyze the expression of cucumber genes were carefully designed in LightCycler Probe Design software 2 (Roche) to ensure the high specificity of PCR reactions. The forward primer 5’-TAT TAA CGA CGA CGA GGC CA-3’ and reverse primer 5’GAA GAT AGA GGA TTT GAG CCC -3’ for CsHMA5.1 were designed in the UTR5’ (position 53-37 bp upstream of the start codon) and Nterminal (position 92-112 bp downstream of the start codon) regions of the gene, respectively. The forward primer 5’- ATT AAC CTC AGT TCG ATC ATC C -3’ and reverse primer 5’- GCT GGG TAT TTG GGC ATA GA -3’ for CsHMA5.2 were both designed in the UTR5’ region (positions 190169 bp and 69-48 bp upstream of the start codon, respectively) of cucumber gene. The forward primer 5’-GTG CTT TCT TTC TGG AAT GC3’and reverse primer 5’-TGA ACC TCG TCA AAT TTA CAC A-3’ were used to amplify the reference gene encoding Clathrin Adaptor Complex Subunit (CACS, acc. no. GW881874). The sRT-PCR reactions were run using Marathon polymerase (A&A Biotechnology) according to following conditions: initial denaturation at 94°C for 30 s, followed by 30 (CsHMA5.1 and CsHMA5.2) or 25 (CsCACS) cycles of denaturation at 94°C for 30 s, annealing at 60°C for 30 s and extension at 72°C for 60 s. The qPCR reactions were run in Lightcycler 480 (Roche) and started with initial denaturation at 95°C for 30 s, followed by 45 cycles of denaturation at 95°C for 10 s, annealing at 60°C for 10 s and extension at 72°C for 12 s. This was followed by a melt cycle that consisted of stepwise increase in temperature from 72 to 99°C. The PCR products were sequenced to confirm primers specificity. The relative quantification analysis (ΔΔCT-method) were performed using the LightCycler® 480 Software, Version 1.5.

Characterization of copper ATPases CsHMA5.1 and CsHMA5.2 from cucumber in plants is not known. Using complementary DNA (cDNA) of cucumber roots (cv Krak) and primers designed for heterologous expression in yeast, the full-length coding regions of CsHMA5.1 and CsHMA5.2 were amplified by PCR, sequenced and deposited in the GenBank database. cDNA sequences of CsHMA5.1 and CsHMA5.2 isolated from cucumber Krak were identical to the relative sequences generated from genomic contigs of cucumbers Chinese long and Borszczagowski (data not shown). They encode two putative proteins of 973 and 926 amino acids, respectively (20). Protein sequence comparisons revealed that CsHMA5.1 shows 58% similarity to CsHMA5.2 and that both proteins show a comparable level of similarity (67% and 65%, respectively) to the homologous protein from A. thaliana (AtHMA5). Nevertheless, the phylogenetic analysis suggests that CsHMA5.1 and AtHMA5 are more closely related (Fig. 1). Both orthologs, CsHMA5.1 and CsHMA5.2, possess the features typical for PATPases (conservative motif DKTGTLT with an Asp residue that is phosphorylated and dephosphorylated during the catalytic cycle) and P1B-ATPases (eight transmembrane-spanning domains (TMDs), CPC(x)6P motif and locus HP) (Fig. 2A and 2B). In addition, the putative copperbinding motifs: CXXC (two motifs in the amino termini), YN (TMDVII) and MxxS (TMDVIII) which are characteristic for copper ATPases (33, 34) were identified in CsHMA5.1 and CsHMA5.2 (Fig. 2A), suggesting that cucumber pumps are putative copper transporters. Organ and subcellular localization of CsHMA5.1 and CsHMA5.2 – The function of heavy metal transporters is strongly determined by their tissue and subcellular localization. The organ expression pattern of CsHMA5.1 and CsHMA5.2 was determined in vegetative organs of 2-week-old cucumbers, including roots, hypocotyls, cotyledons and leaves, using sRT-PCR and semiquantitative real-time PCR. sRT-PCR was also used to establish the CsHMA5.1 and CsHMA5.2 expression level in inflorescence and fruits. Figures 3A and 3B show that the CsHMA5.1 transcript was present only in cucumber roots. In contrast, CsHMA5.1 mRNA was detected in all vegetative organs and inflorescences, suggesting different physiological roles for CsHMA5.1 and 6


monovalent copper ATPases revealed that they form two clearly distinct phylogenetic clusters, one including HMA6s and HMA8s and the other containing HMA7s and HMA5s, which originated from a common ancestral protein related to the present HMA7 proteins from the microalga Chlamydomonas reinhardtii (CrHMA7.1 and CrHMA7.2) (Fig. 1). Interestingly, HMA5 genes are absent in green alga C. reinhardtii, suggesting that they originated from HMA7-like ancestor after the emergence of vascular land plants. Hence, HMA5s are most closely related to HMA7-like pumps. Indeed, when compared to other cucumber Cu+-transporting ATPases, CsHMA5.1 and CsHMA5.2 are the most similar to CsHMA7 (40% and 44%, respectively), and show low sequence similarity to CsHMA6 (16% and 17%, respectively) and CsHMA8 (21% and 26%, respectively). In addition, the in silico predictions (PlantLoc, TargetP servers) of subcellular localization based on sequence comparisons to the already fixed locations suggest that different cucumber Cu+ ATPases might be targeted to different cellular membranes. CsHMA6 and CsHMA8 contain chloroplast-targeting peptides and localize with the highest probability to chloroplasts (data not shown), consistent with the chloroplast localization of their Arabidopsis homologs AtHMA6 and AtHMA8 (15, 16). A similar chloroplast-targeting sequence was identified in CsHMA5.2; however, this protein is predicted to localize with much higher probability in Golgi and vacuolar membranes (data not shown). In comparison, CsHMA5.1 was strongly predicted to localize mainly in the tonoplast or ER (with lower probability), whereas the closest homolog of CsHMA5s, CsHMA7, might be targeted with the same probability to different intracellular membranes, including ER, Golgi and tonoplast (data not shown). These results are consistent with the phylogenetic analysis and the level of sequence homology between cucumber Cu+ ATPases and suggest that CsHMA5.1 and CsHMA5.2 localize to the intracellular membranes rather than to the plasma membrane. Maintenance and the expansion of HMA5 genes indicate that HMA5s play important functions in different plants. However, only AtHMA5 and OsHMA5 have been functionally characterized to date, so the function of additional HMA5 isoforms

Characterization of copper ATPases CsHMA5.1 and CsHMA5.2 from cucumber (~100 kD of CsHMA5 + ~27 kD of GFP). CuATPase activities of CsHMA5.1 or CsHMA5.2 were assayed in the presence of DTT, Na2SO3, bathocuproine disulfonate (BCS) and/or cysteine to establish which form of copper, Cu+, Cu2+ or Cu-thiolate, is required for ATP hydrolysis mediated by cucumber pumps. DTT and Na2SO3 act as reducing agents generating Cu+ in the assay, whereas BCS chelates monovalent copper, and thus the amount of available Cu+ in the reactions containing BCS instead of Na2SO3 is markedly reduced (12). Cysteine was previously shown to positively affect P1B-ATPase activity, probably through the binding of metal and forming a chelated complex interacting with the binding domains of a heavy metal transporter (35, 39, 40). The assay confirmed that CsHMA5.1 and CsHMA5.2 are copper ATPases, as expected from their homology to other characterized copper P1B1ATPases. Both pumps were activated by copper, and the effect of metal was markedly increased by the reducing agent DTT or Na2SO3 (Fig. 5C). In contrast, BCS almost completely abolished the stimulatory effect of Cu on ATP hydrolysis by CsHMA5.1 and CsHMA5.2, indicating that the monovalent Cu+ rather than divalent Cu2+ is the putative substrate for cucumber proteins (Fig. 5C). The maximal activation of CsHMA5.1 and CsHMA5.2 was observed upon addition of cysteine to the media containing both the reducing agent and copper, implicating the importance of Cu-thiolate formation for the interaction of the metal with both transporters (Fig. 5C). Further ATPase activity assays including other metal ions revealed that CsHMA5.1 and CsHMA5.2 are also activated by Ag+, although to a lesser extent (approximately two-fold or three-fold less when compared to copper-induced activity of CsHMA5.1 and CsHMA5.2, respectively). Other heavy metals, including Zn2+, Cd2+, Mn2+, Ni2+ and Co2+, were unable to significantly activate CsHMA5.1 (Fig. 5D), whereas CsHMA5.2 was also slightly (approximately 10% of Cu-induced activity) activated by Cd2+ (Fig. 5E). Similar to Cu, the maximum rate of Ag-ATPase activity of CsHMA5.1 and CsHMA5.2 was observed in the presence of Cys in the assay. Both Cu-ATPase and Ag-ATPase activities of CsHMA5.1 and CsHMA5.2 were increased approximately twofold and three-fold by Cys, respectively (Fig. 5D

ATPase and transport activity of CsHMA5.1 and CsHMA5.2 – Copper ATPases characterized so far, CopA, ATP7A, ATP7B and PAA1/HMA6, required monovalent copper for maximal activation of their ATPase activity (12, 35–38). To establish whether copper or other metals are essential for CsHMA5.1-mediated and CsHMA5.2-mediated ATP hydrolysis, we studied the ATPase activity in vacuolar membranes isolated from the Δycf1 strain expressing CsHMA5.1-GFP or CsHMA5-GFP. The strain lacking the ATP-dependent ABC transporter YCF1 was used to avoid background activity resulting from YCF1-mediated ATP hydrolysis. The immunostaining of vacuolar membranes isolated from yeast expressing CsHMA5.1-GFP or CsHMA5-GFP with anti-CsHMA5.1 or antiCsHMA5.2 antibodies, respectively, revealed the high specificity of antibodies and confirmed that both cucumber proteins were present in vacuolar membranes of yeast cells (Fig. 5A and 5B). The antibodies reacted with the approximately 130 kD proteins corresponding to CsHMA5-GFP fusions 7


CsHMA5.2 in cucumber. Root expression of CsHMA5.2 was approximately 3-fold higher when compared with CsHMA5.1. Nevertheless, the level of CsHMA5.2 expression in vegetative organs was the highest in hypocotyls and leaf petioles. The subcellular localization of CsHMA5.1 and CsHMA5.2 in cucumber roots was further investigated by immunostaining with two specific antibodies raised against the peptides from the deduced amino acid sequences of the N-terminal domains of CsHMA5s (Fig. 2A). Based on the amino acid composition, the molecular masses of CsHMA5.1 and CsHMA5.2 were expected to be close to 105 kD and 98 kD, respectively. Western blot analysis of different cucumber membranes fractionated on a sucrose gradient showed that CsHMA5.1 and CsHMA5.2 colocalize with the marker protein for vacuolar membrane (V-PPase), and not with the marker protein for plasma membrane (PM H+-ATPase). The antibodies reacted with the approximately 100-kD proteins and did not cross-react with other proteins (Fig. 4). Subcellular localization of CsHMA5.1 and CsHMA5.2 was dissimilar to OsHMA5, a plasma membrane-localized homologous transporter in rice (18).

Characterization of copper ATPases CsHMA5.1 and CsHMA5.2 from cucumber and 5E). The kinetic properties of Cu+ and Ag+ interaction with CsHMA5.1 and CsHMA5.2 were studied by measuring the dependence of ATPases activity on metal concentrations (Fig. 6A and 6B). The rate of ATPase hydrolysis mediated by CsHMA5.1 and CsHMA5.2 increased with the increase of metals in the media up to 5 µM (Cu) or 10 µM (Ag), whereas higher Cu or Ag concentrations had an inhibitory effect on both pumps (Fig. 6A and 6B). In the range of stimulatory metal concentrations, CsHMA5.1 showed different, two-fold lower affinity for Cu+ (Km = 1 ± 0.11 µM) when compared to CsHMA5.2 (Km = 0.5 ± 0.08 µM). In contrast, both proteins showed lower but similar affinity for Ag+ (Km = 2.5 ± 0.21 µM and 2.4 ± 0.76 µM for CsHMA5.1 or CsHMA5.2, respectively) (Fig. 6A and 6B). Interestingly, Cu-ATPase activity of CsHMA5.2 was slightly higher, when compared to CsHMA5.1, whereas the Ag-ATPase activity of CsHMA5.1 was significantly higher than the relevant activity of CsHMA5.2 (Fig. 6). Hence, the mechanisms of phosphorylation and dephosphorylation of both proteins resulting from Cu and Ag binding and transport could be slightly different. The Km values for Cu+ were significantly above those expected to be encountered within the intracellular environment, so it is likely that some chelating molecules supply copper to CsHMA5.1 and CsHMA5.2 in cucumber root cells. To confirm that the Cu+-dependent activation of CsHMA5.1 and CsHMA5.2 is related to the ATPdependent transport of copper across the membranes, copper uptake was measured in vacuolar membrane vesicles isolated from the Δycf1 strain expressing CsHMA5.1-GFP and CsHMA5.2-GFP. Similarly to ATPase activities, copper transport by CsHMA5.1 or CsHMA5.2 was also dependent on metal concentration and increased with the increase of copper in reaction media up to 5 µM (Fig. 7). Higher Cu concentrations (10 µM, 50 µM) had an inhibitory effect on CsHMA5.1 and CsHMA5.2 transport activities (Fig. 7). When compared to CsHMA5.1, the Cu transport activity of CsHMA5.2 was higher at the same metal concentrations. Similar to CuATPase activity, the rate of copper transport by CsHMA5.1 or CsHMA5.2 followed normal Michaelis-Menten saturation kinetics over the range of 0-5 µM Cu concentration (Fig. 7). The

apparent Km values for CsHMA5.1-mediated and CsHMA5.2-mediated copper uptake into vacuolar membranes were close to 1 µM or 0.5 µM, respectively (Fig. 7), as expected from the Km calculation for Cu-ATPase activities of cucumber copper pumps. These findings indicate that copperinduced activation of CsHMA5.1 and CsHMA5.2 is strongly correlated with copper transport across vacuolar membranes.

8


Expression of CsHMA5.1 and CsHMA5.2 in yeast confers tolerance to Cu and Ag and increases Cu accumulation within yeast cells – To confirm the ability of CsHMA5.1 and CsHMA5.2 to transport Cu and Ag in vivo, the fusion proteins CsHMA5.1GFP and CsHMA5.2-GFP were expressed in the yeast mutant strain Δace1 that is unable to grow in high concentrations of copper and silver. Ace1 encodes a copper-dependent transcriptional activator of genes encoding proteins involved in copper detoxification and redox homeostasis in yeast, including the metallothionein (MT) proteins Cup1 and Crs5 as well as SOD1 (41-44). Therefore, disruption of Ace1 renders yeast cells extremely sensitive to copper excess. The growth of mutants transformed with the empty vector pUG35 or vectors carrying CsHMA5.1 or CsHMA5.2 was monitored on the control and metal-supplemented media. The presence of CsHMA5.1-GFP and CsHMA5.2-GFP fusions in the vacuolar membranes of the mutant strain was confirmed by fluorescence microscopy (Fig. 8A). The Cu-sensitive mutant phenotype was fully complemented by CsHMA5.1 or CsHMA5.2 (Fig. 8B). Both proteins also conferred increased resistance of the same yeast to silver (Fig. 8B). These data suggest that cucumber CsHMA5s contribute to copper and silver detoxification in yeast cells. To investigate further the mechanism of CsHMA5.1-mediated and CsHMA5.2-mediated tolerance of Δace1 to copper, the accumulation of Cu was compared in mutant strains transformed with an empty vector or with vectors carrying cucumber genes. Analysis of metal content in cells growing in liquid medium supplemented with 100 µM CuCl2 showed that yeast expressing CsHMA5.1 or CsHMA5.2 accumulated a higher amount of copper during 8 h of exposure to metal than the strain transformed with the empty vector (Fig. 8C), suggesting that CsHMA5-mediated

Characterization of copper ATPases CsHMA5.1 and CsHMA5.2 from cucumber copper tolerance is related to the enhanced intracellular sequestration of copper rather than the increased Cu efflux out of the yeast cells. This finding was in agreement with the vacuolar localization of CsHMA5s in yeast.

increased vacuolar copper sequestration cucumber roots in conditions of Cu excess.

in

DISCUSSION

ATP-dependent Cu transport operates in tonoplast vesicles from cucumber root cells – Immunolocalization of CsHMA5.1 and CsHMA5.2 in the tonoplast as well as the effect of protein expression in yeast indicates that both ATPases play a role in active copper transport across the vacuolar membrane of cucumber cells. Indeed, ATP-dependent copper transport activity was detected in tonoplast vesicles prepared from the roots of cucumbers (Fig. 9C). Moreover, the rate of active copper accumulation within vacuolar membranes was significantly dependent on the availability of copper in the nutrient solution. Namely, the ATP-dependent Cu transport in vesicles prepared from plants grown under Cu toxicity or Cu deficiency was over 4-fold higher or almost 5-fold lower, respectively, when compared to the control (Fig. 9C). These results were consistent with the changes in CsHMA5.2 transcript and protein levels under copper stress, suggesting that CsHMA5.2 plays a role in the 9


As far, only two genes encoding plant HMA5-like P1B-ATPases have been functionally characterized: OsHMA5 from rice and AtHMA5 from A. thaliana, respectively, (17, 18, 45). They are expressed predominantly in pericycle cells of roots and are involved in Cu+ compartmentalization and detoxification, probably through active Cu loading to the xylem of roots and other organs (17, 18, 45). Moreover, rice OsHMA5 has been localized in the plasma membrane, confirming the predicted role of plant HMA5s in copper export from root cells (18). Though AtHMA5 has not been localized yet, the knock-out of the gene encoding the Arabidopsis transporter results in increased hypersensitivity of plants to Cu and enhanced accumulation of the metal in roots under Cu excess, suggesting that AtHMA5 may be involved in copper efflux from root cells, and therefore it could also localize to the plasma membrane (17). However, neither OsHMA5 nor AtHMA5 have been subjected to biochemical and kinetic studies confirming their roles in copper distribution in plant cells. Though Arabidopsis possess only one HMA5 pump, multiple genes encoding homologous proteins have been identified in other plants, including rice, however the relevance of these extra Cu-ATPases in not known (19). This work provides the first functional and biochemical characterization of plant HMA5-like P1B-ATPases, CsHMA5.1 and CsHMA5.2 from cucumber, and reveals that orthologous transporters in plants are differently displayed to achieve organismal copper homeostasis. Contrary to plasma membrane-localized OsHMA5, CsHMA5.1 and CsHMA5.2 are associated with the vacuolar membrane, indicating that they function in vacuolar metal sequestration rather than in metal efflux out of the cells. However, different expression of CsHMA5.1 and CsHMA5.2 in cucumber organs suggests different biological roles for the two cucumber HMA5s. When studied in yeast vacuolar membranes, CsHMA5.1 and CsHMA5.2 were activated in the presence of copper and silver, similarly to homologous proteins

CsHMA5.1 and CsHMA5.2 are differentially regulated by copper stress – Both CsHMA5.1 and CsHMA5.2 are expressed in cucumber roots. In order to determine how copper stress affects the level of CsHMA5.1 and CsHMA5.2 transcripts, qPCR was performed using the bulk of roots from plants grown upon Cu excess or Cu deficiency. As shown in Fig. 9A, the expression of CsHMA5.1 was not significantly affected by any of the treatments. Similarly, the level of CsHMA5.1 protein in tonoplast membranes isolated from the same roots was not significantly changed upon Cu stress (Fig. 9B). In contrast, CsHMA5.2 transcript and protein levels were markedly reduced or elevated upon Cu deficiency or Cu excess, respectively. These findings suggest that CsHMA5.1 is a constitutive root-specific vacuolar copper transporter unaffected during copper stress, whereas CsHMA5.2 functions in copper detoxification under copper excess.

Characterization of copper ATPases CsHMA5.1 and CsHMA5.2 from cucumber copper-limiting conditions. Detailed studies on human ATP7B revealed that copper-mediated activation of ATPase is a result of copper binding to autoinhibitory CxxC motifs, inducing conformational changes within the protein that enable ATP hydrolysis (49, 50). The copper ATPases from other organisms, including plants, are probably regulated by the same autoinhibitory mechanism. As shown in Fig. 2, two CxxC motifs are present in CsHMA5.1 (CSAC and CNSC) and CsHMA5.2 (CSAC and CTSC). The presence of different amino acids in one of the two motifs (asparagine in CsHMA5.1 instead of threonine in CsHMA2) could affect copper binding and thus Cu-ATPase activity of both pumps. Nevertheless, the apparent Km values of CsHMA5s for Cu were very similar to those previously reported for human ATPases ATP7B and ATP7A (1 and 2.5 μM, respectively) (37), for CopA from E. coli and from A. fulgidus (5 and 3.9 μM, respectively) (35, 36) as well as for plant AtHMA6/PAA1 (0.5 μM) (12). In comparison to Cu+, the affinities of both cucumber pumps for Ag+ were very similar and lower (Km ~ 2.5 μM), suggesting that the mechanism of Cu+ and Ag+ binding by these proteins might be different. Ag+ is not a physiological substrate for Cu-ATPases; hence its stimulatory effect on activity of copper pumps probably results from the chemical (electropositive, singly charged cations) similarity between Ag+ and Cu+ ions (12). However, the difference in Ag+ (0.126 nm) and Cu+ (0.096 nm) ionic radii could affect metal binding and thus ATPase activity of CsHMA5s. Differences in affinity to Cu+ and Ag+ were previously shown for CopA from A. fulgidus (35) and AtHMA6/PAA1 from A. thaliana (12), whereas CopA from Bacillus subtilis showed similar Km for both ions (51). In addition, the rate of CsHMA5.1-mediated and CsHMA5.2-mediated ATP hydrolysis was higher in the presence of Cu+ than upon addition of an equal concentration of Ag+ to the reaction media. The phosphorylation of AtHMA6/PAA1 was also significantly (over two-fold) higher in the presence of copper than in the presence of silver (12). In contrast, CopA from A. fulgidus was activated 4-times faster by Ag+ than by Cu+ (35), whereas CopA from Bacillus subtilis was activated by both ions with similar efficiency (51). It has 10


in bacteria (CopA), humans (ATP7A and ATP7B) and A. thaliana (PAA1) (12, 35–38), confirming that they are putative copper ATPases. Interestingly, the maximal Cu-dependent ATPase activity of CsHMA5.1 and CsHMA5.2 required the presence of Cys and reducing agents (DTT and Na2SO3) in the assay medium. Similar Cys-induced ATPase activity was previously reported for the Cu-ATPase CopA (A. fulgidus) and Cd-ATPases ZntA and AtHMA2 from E. coli and A. thaliana, respectively (35, 39, 40). It has already been proposed that metal-thiolate complexes rather than metal ions are the substrates for heavy metal ATPases (39, 40, 46). Using a yeast two-hybrid assay, Andres-Colas et al. (2006) demonstrated that the metal-binding domains of AtHMA5 interact with Arabidopsis ATX1-like Cu chaperones, confirming that chelated copper rather than ionic Cu+ is a substrate for the copper pump (17). Here we show that Cu-thiolate is also a putative substrate for the cucumber homolog of HMA5 pumps. Contrary to Cys, the positive effect of reducing agents on copper ATPase activity probably results from their action on the Cu redox state (47,48). Reducing agents appear to be necessary to keep copper in a reduced state, a form activating phosphorylation of copper ATPases. Hence both DTT and Na2SO3 had a similar positive effect on CsHMA5.1 and CsHMA5.2 activities, probably by maintaining copper in a monovalent form (12). A strong negative effect of the Cu+ chelator BCS on CsHMA5.1 and CsHMA5.2 activities confirmed that Cu+ is required for cucumber protein activity. Interestingly, in the absence of reducing agents the copper-mediated activation of CsHMA5.1 and CsHMA5.2 was still significant when compared to the Cu-deprived control assay, suggesting that in the conditions of our experiment copper was predominantly present in the Cu+ form. Indeed, recent studies on AtHMA6/PAA1 in membranes isolated from Lactococcus lactis demonstrated that a majority (70%) of copper in the reaction medium was rapidly reduced (in less than 5 min) by the buffer and isolated membranes (12). The apparent Km values of CsHMA5.1 and CsHMA5.2 for Cu+, estimated using ATPase and a transport assay, were slightly different (close to 1 μM and 0.5 μM, respectively) and suggest that CsHMA5.2 binds Cu more efficiently under

Characterization of copper ATPases CsHMA5.1 and CsHMA5.2 from cucumber participate in the maintenance of copper homeostasis either through the import of copper into the cell (PCC7942 and PCC6803 in cyanobacteria Synechococcus and Synechocystis, respectively) and intracellular compartments to supply copper to copper-dependent enzymes (ATP7A, ATP7B, Ccc2p, AtHMA6/PAA1, AtHMA8/PAA2, AtHMA7/RAN1) or through the active efflux of copper out of the cell (CopA, OsHMA5) (12, 18, 56, 57). In addition, our study provides the first evidence for the involvment of P1B1-ATPases in the active influx of copper into vacuoles. The subcellular localization of CsHMA5.1 and CsHMA5.2 and increased tolerance of yeast expressing cucumber pumps to copper clearly indicate the function of both proteins in detoxification of cells from copper through the vacuolar sequestration of Cu excess. The expression of homologous proteins in A. thaliana and rice was up-regulated by excess Cu, confirming the putative function of AtHMA5 and OsHMA5 in copper detoxification (17,18). Interestingly, CsHMA5.1 and CsHMA5.2 expression and protein levels were differentially affected by Cu stress. Namely, CsHMA5.1 was not affected by different copper availability, whereas CsHMA5.2 was significantly up-regulated or down-regulated upon copper excess or deficiency, respectively. Similarly, the ATP-dependent copper transport into tonoplast membranes isolated from cucumber roots was also strongly increased under copper excess and markedly reduced upon Cu deficiency. These findings indicate that CsHMA5.2 might be responsible for the increased vacuolar copper sequestration in cucumber root cells under Cu toxicity and reveal different regulation of the two CsHMA5 isoforms by copper. Hence, we propose that the functional diversity of CsHMA5.1 and CsHMA5.2 comes from variation in their regulatory mechanisms (different expression patterns) and possibly from some structural differences between both proteins (different affinities for Cu, different ATPase activities).

REFERENCES

11


already been evidenced that copper ATPases from various organisms might behave similarly or differently with copper and silver. Namely, CopA from A. fulgidus is mainly present in the ionbinding phosphorylated form in the presence of copper, or in a metal-free phosphorylated form in the presence of silver (35). In contrast, the ionbinding phosphorylated form of AtHMA6/PAA1 is prevalent in the presence of either copper or silver (12). Although the hydrolytic activities of CsHMA5.1 and CsHMA5.2 were copper- or silver-dependent, the highest concentration of metals resulted in the inhibition of ATP hydrolysis. A similar inhibitory effect of higher Cu concentrations was observed when the ATP-dependent copper transport was assayed. Excessive copper also inhibited the ATPase activity of prokaryotic copper ATPases (CopB from E. hirae and A. fulgidus) as well as human ATP7A and plant AtHMA6/PAA1 (11, 12, 38, 52, 53). High concentrations of metal ions could prevent rapid dissociation of the transported ions from the metal binding site of P1B-type ATPase and thus reduce the enzyme turnover rate (12). On the other hand, copper-mediated inhibition of P1B-ATPase may result from the negative effect of metal excess on the protein structure, on the active sites of the enzyme or on the membrane lipids. Excessive copper was found to inhibit protein activity by inducing protein precipitation or by inducing conformational changes at several key residues of proteins (54,55). The ability of CsHMA5.1 and CsHMA5.2 to transport Ag and Cu was confirmed by studying Cu and Ag tolerance of yeast expressing cucumber proteins. Both CsHMA5s increased yeast tolerance to copper and silver through intracellular copper sequestration, indicating that they actually transport Cu+ and Ag+ in vivo. Similarly, AtHMA5, AtHMA6/PAA1 and OsHMA5 have been shown to participate in intracellular copper sequestration when expressed in the Δccc2 yeast strain, lacking the Golgi-resident endogenous copper Cu+/Ag+-ATPase Ccc2p (12, 18, 45). According to available data, P1B1-ATPases

Characterization of copper ATPases CsHMA5.1 and CsHMA5.2 from cucumber 1. 2. 3. 4.

5. 6. 7.

9.

10.

11.

12.

13.

14.

15.

16.

17.

18.

12


8.

Koch, K. A., Pena M. O. and Thiele, D. J. (1997) Copper-binding motifs in catalysis, transport, detoxification and signalling. Chem. Biol. 4, 549–560 Yruela, I. (2005) Copper in plants. Braz. J. Plant Physiol. 17, 145–156 Axelsen, K. B. and Palmgren M.G. (2001) Inventory of the Superfamily of P-Type Ion Pumps in Arabidopsis. Plant Physiol. 126, 696–706 Cobbett, C. S., Hussain, D., and Haydon, M. J. (2003) Structural and functional relationships between type 1B heavy metal-transporting P-type ATPases in Arabidopsis. New Phytol. 159, 315– 321 Argüello, J. M. (2003) Identification of Ion-Selectivity Determinants in Heavy-Metal Transport P 1B -type ATPases. J.Membrane Biol. 195, 93–108 Hall, J. L., and Williams, L. E. (2003) Transition metal transporters in plants. J.Exp.Bot. 54, 2601– 2613 Williams, L. E., and Mills, R. F. (2005) P(1B)-ATPases--an ancient family of transition metal pumps with diverse functions in plants. Trends Plant Sci. 10, 491–502 Seigneurin-Berny, D., Gravot, A., Auroy, P., Mazard, C., Kraut, A., Finazzi, G., Grunwald, D., Rappaport, F., Vavasseur, A., Joyard, J., Richaud, P., and Rolland, N. (2006) HMA1, a new CuATPase of the chloroplast envelope, is essential for growth under adverse light conditions. J.Biol.Chem. 281, 2882–2892 Moreno, I., Norambuena, L., Maturana, D., Toro, M., Vergara, C., Orellana, A., Zurita-Silva, A., and Ordenes, V. R. (2008) AtHMA1 is a thapsigargin-sensitive Ca2+/heavy metal pump. J.Biol.Chem. 283, 9633–9641 Mikkelsen, M. D., Pedas, P., Schiller, M., Vincze, E., Mills, R. F., Borg, S., Møller, A., Schjoerring, J. K., Williams, L. E., Baekgaard, L., Holm, P. B., and Palmgren, M. G. (2012) Barley HvHMA1 is a heavy metal pump involved in mobilizing organellar Zn and Cu and plays a role in metal loading into grains. PloS One 7, e49027 Voskoboinik, I., Mar, J., Strausak, D., and Camakaris, J. (2001) The regulation of catalytic activity of the menkes copper-translocating P-type ATPase. Role of high affinity copper-binding sites. J.Biol.Chem. 276, 28620–28627 Catty, P., Boutigny, S., Miras, R., Joyard, J., Rolland, N., and Seigneurin-Berny, D. (2011) Biochemical characterization of AtHMA6/PAA1, a chloroplast envelope Cu(I)-ATPase. J.Biol.Chem. 286, 36188–36197 Hirayama, T., Kieber, J. J., Hirayama, N., Kogan, M., Guzman, P., Nourizadeh, S., Alonso, J. M., Dailey, W. P., Dancis, A., and Ecker, J. R. (1999) RESPONSIVE-TO-ANTAGONIST1, a Menkes/Wilson Disease–Related Copper Transporter, Is Required for Ethylene Signaling in Arabidopsis. Cell 97, 383–393 Woeste, K. E. and Kieber J.J. (2000) A Strong Loss-of-Function Mutation in RAN1 Results in Constitutive Activation of the Ethylene Response Pathway as Well as a Rosette-Lethal Phenotype. Plant Cell 12, 443–455 Shikanai, T., Müller-Moulé, P., Munekage, Y., Niyogi, K.K. and Pilon, M. (2003) PAA1, a PType ATPase of Arabidopsis, Functions in Copper Transport in Chloroplasts. Plant Cell. 15, 1333–1346 Abdel-Ghany, S. E., Müller-Moulé, P., Niyogi, K. K., Pilon, M., and Shikanai, T. (2005) Two Ptype ATPases are required for copper delivery in Arabidopsis thaliana chloroplasts. Plant Cell 17, 1233–1251 Andrés-Colás, N., Sancenón, V., Rodríguez-Navarro, S., Mayo, S., Thiele, D. J., Ecker, J. R., Puig, S., and Peñarrubia, L. (2006) The Arabidopsis heavy metal P-type ATPase HMA5 interacts with metallochaperones and functions in copper detoxification of roots. Plant J. 45, 225–236 Deng, F., Yamaji, N., Xia, J., and Ma, J. F. (2013) A member of the heavy metal P-type ATPase OsHMA5 is involved in xylem loading of copper in rice. Plant Physiol. 163, 1353–1362

Characterization of copper ATPases CsHMA5.1 and CsHMA5.2 from cucumber 19.

20.

21.

22.

23.

25. 26. 27.

28. 29. 30. 31.

32. 33. 34. 35.

36. 37.

13


24.

Migeon, A., Blaudez, D., Wilkins, O., Montanini, B., Campbell, M.M., Richaud, P., Thomine, S., Chalot, M. (2010) Genome-wide analysis of plant metal transporters, with an emphasis on poplar. Cell. Mol. Life Sci. 67, 3763-84 Migocka, M., Papierniak, Maciaszczyk-Dziubinska, E., Posyniak, E., and Kosieradzka, A. (2014) Molecular and biochemical properties of two P1B2 -ATPases, CsHMA3 and CsHMA4, from cucumber. Plant Cell Environ. 10.1111/pce.12447 Migocka, M., Papierniak, A., Kosatka, E., and Klobus, G. (2011) Comparative study of the active cadmium efflux systems operating at the plasma membrane and tonoplast of cucumber root cells. J.Exp.Bot. 62, 4903–4916 Brachmann, C. B., Davies, A., Cost, G. J., Caputo, E., Li, J., Hieter, P., and Boeke, J. D. (1998) Designer deletion strains derived from Saccharomyces cerevisiae S288C: a useful set of strains and plasmids for PCR-mediated gene disruption and other applications. Yeast 14, 115–132 Niedenthal, R. K., Riles, L., Johnston, M., and Hegemann, J. H. (1996) Green fluorescent protein as a marker for gene expression and subcellular localization in budding yeast. Yeast 12, 773–786 [online] http://www.ncbi.nlm.nih.gov/pubmed/8813764 Thorsen, M., Di, Y., Tängemo, C., Morillas, M., Ahmadpour, D., Van der Does, C., Wagner, A., Johansson, E., Boman, J., Posas, F., Wysocki, R., and Tamás, M. J. (2006) The MAPK Hog1p modulates Fps1p-dependent arsenite uptake and tolerance in yeast. Mol.Biol.Cell. 17, 4400–4410 Maciaszczyk-Dziubinska, E., Migdal, I., Migocka, M., Bocer, T., and Wysocki, R. (2010) The yeast aquaglyceroporin Fps1p is a bidirectional arsenite channel. FEBS lett. 584, 726–732. Norling, B. (2000) Methods in Biotechnology, Aqueous Two-Phase Systems: Methods and Protocols, Humana Press Inc., Totowa, NJ Nakanishi, Y., Saijo, T., Wada, Y., and Maeshima, M. (2001) Mutagenic analysis of functional residues in putative substrate-binding site and acidic domains of vacuolar H+-pyrophosphatase. J.Biol.Chem. 276, 7654–7660 Bradford, M. M. (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Analytical Biochemistry 72, 248–254 Ames, B. N. (1966) Assay of Inorganic Phosphate, Total Phosphate and Phosphatases: Methods in Enzymology 8 Academic Press, New York, NY Warzybok, A., and Migocka, M. (2013) Reliable reference genes for normalization of gene expression in cucumber grown under different nitrogen nutrition. PloS One 8, e72887 Migocka, M., Papierniak, A., Warzybok, A., and Kłobus, G. (2012) CsPDR8 and CsPDR12, two of the 16 pleiotropic drug resistance genes in cucumber, are transcriptionally regulated by phytohormones and auxin herbicide in roots. Plant Growth Regul. 67, 171–184 Tamura, K., Stecher, G., Peterson, D., Filipski, A., and Kumar, S. (2013) MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0. Mol. Biol. Evol. 30, 2725-2729 Huster, D., and Lutsenko, S. (2003) The distinct roles of the N-terminal copper-binding sites in regulation of catalytic activity of the Wilson’s disease protein. J.Biol.Chem. 278, 32212–32218 Mandal, A.K., Yang, Y., Kertesz, T.M., Arguello, J.M. (2004) Identification of the transmembrane metal binding site in Cu+-transporting PIB-type ATPases. J. Biol. Chem. 279, 54802–54807 Mandal, A. K., Cheung, W. D., and Argüello, J. M. (2002) Characterization of a thermophilic Ptype Ag+/Cu+-ATPase from the extremophile Archaeoglobus fulgidus. J.Biol.Chem. 277, 7201– 7208 Fan, B., and Rosen, B. P. (2002) Biochemical characterization of CopA, the Escherichia coli Cu(I)translocating P-type ATPase. J.Biol.Chem. 277, 46987–46992 Barnes, N., Tsivkovskii, R., Tsivkovskaia, N., and Lutsenko, S. (2005) The copper-transporting ATPases, menkes and wilson disease proteins, have distinct roles in adult and developing cerebellum. J.Biol.Chem. 280, 9640–9645


39. 40. 41.

42.

44. 45.

46.

47.

48. 49.

50. 51.

52. 53.

54.

55.

14


43.

Hung, Y.H., Layton, M.J., Voskoboinik, I., Mercer, J.F., Camakaris, J. (2007) Purification and membrane reconstitution of catalytically active Menkes copper-transporting P-type ATPase (MNK; ATP7A). Biochem. J. 410,569-579 Sharma, R. (2000) The ATP Hydrolytic Activity of Purified ZntA, a Pb(II)/Cd(II)/Zn(II)translocating ATPase from Escherichia coli. J.Biol.Chem. 275, 3873–3878 Eren, E., and Argüello, J. M. (2004) Arabidopsis HMA2, a divalent heavy metal-transporting P(IB)-type ATPase, is involved in cytoplasmic Zn2+ homeostasis. Plant Physiol. 136, 3712–3723 Gralla E.B., Thiele D.J., Silar P. and Valentine J.S. (1991) ACE1, a copper-dependent transcription factor, activates expression of the yeast copper, zinc superoxide dismutase gene. Proc. Natl. Acad. Sci. U. S .A., 88, 8558-8562 Culotta, V. C., Joh, H. D., Lin, S. J., Slekar, K. H., and Strain, J. (1995) A physiological role for Saccharomyces cerevisiae copper/zinc superoxide dismutase in copper buffering. J.Biol.Chem. 270, 29991–29997 Thiele, D. J. (1988) ACE1 regulates expression of the Saccharomyces cerevisiae metallothionein gene. Mol. Cell. Biol. 8, 2745–2752 Portnoy, M.E., Schmidt, P.J., Rogers, R.S., Culotta, V.C. (2001) Metal transporters that contribute copper to metallochaperones in Saccharomyces cerevisiae. Mol. Genet. Genomics 265, 873–882 Kobayashi, Y., Kuroda, K., Kimura, K., Southron-Francis, J. L., Furuzawa, A., Kimura, K., Iuchi, S., Kobayashi, M., Taylor, G. J., and Koyama, H. (2008) Amino acid polymorphisms in strictly conserved domains of a P-type ATPase HMA5 are involved in the mechanism of copper tolerance variation in Arabidopsis. Plant Physiol. 148, 969–980 Mitra, B., and Sharma, R. (2001) The Cysteine-Rich Amino-Terminal Domain of ZntA, a Pb(II)/Zn(II)/Cd(II)-Translocating ATPase from Escherichia coli , is not essential for Its function. Biochemistry 40, 7694–7699 Voskoboinik, I., Brooks, H., Smith, S., Shen, P., and Camakaris, J. (1998) ATP-dependent copper transport by the Menkes protein in membrane vesicles isolated from cultured Chinese hamster ovary cells. FEBS Lett.435, 178–182 Rensing, C., Fan, B., Sharma, R., Mitra, B., and Rosen, B. P. (2000) CopA: An Escherichia coli Cu(I)-translocating P-type ATPase. Proc. Natl. Acad. Sci. U.S.A. 97, 652–656 Tsivkovskii, R., MacArthur, B. C., and Lutsenko, S. (2001) The Lys1010-Lys1325 fragment of the Wilson’s disease protein binds nucleotides and interacts with the N-terminal domain of this protein in a copper-dependent manner. J.Biol.Chem. 276, 2234–2242 Barry, A. N., Shinde, U., and Lutsenko, S. (2010) Structural organization of human Cutransporting ATPases: learning from building blocks. J.Biol.Inorg.Chem. 15, 47–59 Banci, L., Bertini, I., Ciofi-Baffoni, S., Gonnelli, L., Su, X.C. (2003) Structural basis for the function of the N-terminal domain of the ATPase CopA from Bacillus subtilis. J. Biol. Chem. 278, 50506-13 Bissig, K.-D., Voegelin, T. C., and Solioz, M. (2001) Tetrathiomolybdate inhibition of the Enterococcus hirae CopB copper ATPase. FEBS Lett. 507, 367–370 Mana-Capelli, S., Mandal, A. K., and Argüello, J. M. (2003) Archaeoglobus fulgidus CopB is a thermophilic Cu2+-ATPase: functional role of its histidine-rich-N-terminal metal binding domain. J.Biol.Chem. 278, 40534–41 Su, Y., Hu, F., Hong, M. (2012) Paramagnetic Cu(II) for probing membrane protein structure and function: inhibition mechanism of the influenza M2 proton channel. J. Am. Chem. Soc. 134, 8693702 Lee, A.M., Singleton, S.F. (2004) Inhibition of the Escherichia coli RecA protein: zinc(II), copper(II) and mercury(II) trap RecA as inactive aggregates. J. Inorg. Biochem. 98, (11):1981-6


57.

Phung, L. T., Ajlani, G., and Haselkorn, R. (1994) P-type ATPase from the cyanobacterium Synechococcus 7942 related to the human Menkes and Wilson disease gene products. Proc.Natl. Acad. Sci. U.S.A 91, 9651–9654 Tottey, S., Rich, P. R., Rondet, S. A., and Robinson, N. J. (2001) Two Menkes-type atpases supply copper for photosynthesis in Synechocystis PCC 6803. J.Biol.Chem. 276, 19999–20004

Acknowledgments - We greatly appreciate Mrs Beata Kuligowska and Mrs Anna Szawłowska-Kubik (Wroclaw University, Institute of Experimental Biology, Department of Molecular Plant Physiology) for technical assistance. FOOTNOTES

FIGURE LEGENDS FIGURE 1. An unrooted phylogenetic tree of the HMA5-8 subgroup of Heavy Metal ATPases from selected plants. The analysis was performed using maximum likelihood method in MEGA version 6.0 following sequence alignment in ClustalW, and tested by 1000 bootstrap replicates. The lengths of branches are proportional to phylogenetic distances. Different groups within P1B1-ATPase subfamily are indicated by shaded circles. Cucumber HMA5.1 and HMA5.2 proteins are marked in bold. The sequences used for analysis are available under the following accession numbers: AtHMA5 (At1g63440.1), AtHMA6 (At4g33520.1), AtHMA7 (At5g44790.1), AtHMA8 (At5g21930.1), OsHMA4 (Os02g10290), OsHMA5 (Os04g46940), OsHMA6 (Os02g07630), OsHMA7 (Os08g37950), OsHMA8 (Os03g08070), PtHMA5.1 (eugene3.00030979), PtHMA5.2 (fgenesh4_pg.C_LG_I000939), PtHMA5.3 (estExt_Genewise1_v1.C_LG_III2138), PtHMA5.4 (eugene3.00010321), PtHMA6.1 (gw1.III.2222.1), PtHMA6.2 (gw1.I.66.1), PtHMA7.1 (estExt_Genewise1_v1.C_290004), PtHMA7.2 (fgenesh4_pg.C_LG_III000552), CrHMA6 (SKA_Chlre2_kg.scaffold_8000202) CrHMA7.1 (SKA_Chlre2_kg.scaffold_45000101), CrHMA7.2 (HAN_e_gwW.35.64.1), SmHMA5.1 (e_gw1.6.816.1), SmHMA5.2 (e_gw1.13.638.1), SmHMA5.3 (fgenesh1_pm.C_scaffold_13000004), SmHMA6 (e_gw1.93.138.1), SmHMA7.1 (fgenesh1_pm.C_scaffold_42000009), SmHMA7.2 (e_gw1.67.167.1), SmHMA8 (gw1.3.975.1), PpHMA6.1 (e_gw1.19.16.1), PpHMA6.2 (estExt_Genewise1.C_1210028), PpHMA7.1 (fgenesh1_pg.scaffold_94000062), PpHMA7.2 (estExt_gwp_gw1.C_1840090), PpHMA8 (e_gw1.197.110.1), SbHMA5.1 (Sb06g024900), SbHMA5.2 (Sb06g024910), SbHMA5.3 (estExt_Genewise1.C_chr_41453), SbHMA6 (estExt_Genewise1.C_chr_78080), SbHMA8 (Sb01g045340), VvHMA5.1 (XP_002269802), VvHMA5.2 (XP_002269758), VvHMA5.3 (XP_002269839), VvHMA5.4 (XP_002282923), VvHMA6.1 (XP_002274497), VvHMA6.2 (XP_002274497), VvHMA7 (XP_002276004), VvHMA8 (XP_002280050). Cucumber proteins CsHMA6, CsHMA7 and CsHMA8 were annotated based on the genes identified in contigs ACHR01001184.1, ACHR01000228.1 and ACHR01004999.1, respectively, of cucumber Chinese long genome (20). Two CsHMA5.1 and CsHMA5.2 sequences are available under accession numbers KJ818254 and KJ818255, respectively. 15


*This work was supported by the Polish Ministry of Science and Higher Education (grant no. IP2011 035871) and Wroclaw University (grant no. 1227/M/IBR/11). 1 To whom correspondence should be addressed: Magdalena Migocka, University of Wroclaw, Institute of Experimental Biology, Department of Plant Molecular Physiology, Kanonia 6/8, 50-328 Wroclaw, Poland, tel. +48 (71) 3754113, mail: [email protected] 2 The abbreviation used are: BCS, bathocuproine disulfonate; Cys, cysteine; DTT, dithiothreitol; HMA, Heavy Metal ATPases;


FIGURE 2. Comparative sequence analysis of cucumber HMA5.1 and HMA5.2 proteins. A. ClustalW alignment of deduced amino acid sequences of CsHMA5.1 and CsHMA5.2. Consensus amino acid residues are marked with asterisks. Boxes indicate the position of motifs CxxC, YN and MxxS, which are specific for copper ATPases, the motif DKTGTLT common for all P-ATPases, as well as the motifs CPC and locus HP, both characteristic for the subfamily of P1B-ATPases. The sequences of peptides used for preparation of two antibodies specific for CsHMA5.1 and CsHMA5.2 are underlined. The putative transmembrane domains (TMDs) are shaded in grey and numbered. B. Membrane topology of CsHMA5.1 and CsHMA5.2 proteins predicted with TMHMM server 2.0 and visualized in TMRpres2d.

FIGURE 4. Subcellular localization of CsHMA5.1 and CsHMA5.2 in cucumber roots. Western blot analysis of microsomal membranes isolated from cucumber roots and fractionated in a discontinuous sucrose gradient (20%/28%/32%/42%). Fifteen micrograms of membrane proteins from each fraction were electrophoresed in 10% (w/v) SDS-PAGE and transferred onto nitrocellulose membrane. The detection was performed using the primary antibodies for CsHMA5.1, CsHMA5.2, plasma membrane H+ATPase (PM H-ATPase) and vacuolar pyrophosphatase (V-PPase). M -protein marker. FIGURE 5. ATPase activity of CsHMA5.1 and CsHMA5.2 in vacuolar membranes isolated from yeast strain Δycf1. A-B. Immunolocalization of the CsHMA5.1-GFP (A) or CsHMA5.2-GFP (B) fusion proteins in fractions enriched in vacuolar membranes isolated from Δycf1 strain. The membranes prepared from yeast transformed with empty plasmid or plasmids carrying CsHMA5.1 or CsHMA5.2 were analyzed by immunoblotting with specific antibodies generated against CsHMA5.1 or CsHMA5.2. C. The effect of monovalent copper chelator BCS, reducing agents and cysteine on Cu-ATPase activities of CsHMA5.1 and CsHMA5.2. The ATPase activities were determined in the presence of 5µM CuCl2 (saturating Cu concentration). Data represent means ± SD. Different letters indicate the significant differences between CsHMA5.1 or CsHMA5.2 activities determined with or without BCS, reducing agents and Cys in the reaction media (a) or the activities measured in the presence of Na2SO3 with or without cysteine (b). D-E. Activation of CsHMA5.1 (D) and CsHMA5.2 (E) by different metals or metals and cysteine. ATP hydrolysis was measured in the presence of 5 µM concentration of each metal (white bars) or metal and 5 mM cysteine (black bars). Data represent means ± SD. Different letters indicate the significant differences between CsHMA5.1 and CsHMA5.2 activities determined with or without metals in the reaction media (a) or between the activities measured with or without cysteine (b). FIGURE 6. Cu+ and Ag+ dependence of CsHMA5.1 and CsHMA5.2 activities in vacuolar membranes isolated from yeast strain Δycf1 expressing fusion proteins CsHMA5.1-GFP or CsHMA5.2-GFP. ATP hydrolysis was measured in the presence of different concentrations of Cu (A) or Ag (B) and 5 mM Cys in reaction media. Na2SO3 (300 µM) was included in the assay containing copper ions. Data represent means ± SD. The letters indicate the significant differences between CsHMA5.1 or CsHMA5.2 activities determined at different concentrations of metals (a) or between CsHMA5.1 and CsHMA5.2 activities measured at the same concentration of metal (b). Inset, the rate of ATP hydrolysis mediated by CsHMA5.1 or CsHMA5.2 versus metals concentrations measured in the presence of 0-5 µM Cu (A) or 016


FIGURE 3. Organ expression profile of CsHMA5.1 and CsHMA5.2 in cucumber. A. Quantitative realtime PCR analysis of CsHMA5.1 and CsHMA5.2 expression in roots, hypocotyls, cotyledons, petioles and leaves. The letters indicate significant differences (P < 0.05) between CsHMA5.1 and CsHMA5.2 expression level in roots (a) or between the amount of CsHMA5.2 transcript in different cucumber organs. Inset, the semiquantitative reverse transcription-polymerase chain reaction analysis of CsHMA5.1 and CsHMA5.2 in the same organs. B. Semiquantitative reverse transcription-polymerase chain reaction analysis of CsHMA5.1 and CsHMA5.2 expression in cucumber flowers and fruits. hyp, hypocotyl; cot, cotyledon; pet, petiole; mp, male perianth; pist, pistils; fp, female perianth; stam, stamen.

Characterization of copper ATPases CsHMA5.1 and CsHMA5.2 from cucumber 10 µM Ag (non-inhibitory metal concentrations) in reaction media. The apparent Km ~ 1 µM or 2.5 µM were calculated for the Cu-ATPase activity and Ag-ATPase activity, respectively, of CsHMA5.1. The Cudependent and Ag-dependent activities of CsHMA5.2 had a Km close to 0.5 µM or 2.4 µM for Cu and Ag, respectively. V – the rate of ATPase activity (µg Pi x mg-1 protein x h-1). FIGURE 7. Copper transport into vacuolar membranes isolated from yeast strain Δycf1 expressing fusion protein CsHMA5.1-GFP and CsHMA5.2-GFP. Data represent means ± SD. The letters indicate significant differences between transport activities determined with different concentrations of metals in the reaction media (a) or between CsHMA5.1-mediated or CsHM5.2-mediated transport determined at the same concentration of metal (b). Inset, copper concentration-dependence of copper uptake by vacuolar vesicles in the presence of 0-5 µM Cu in reaction media. The apparent Km ~ 0.94 ± 0.15 µM and 0.48 ± 0.05 µM were calculated for the Cu transport activity of CsHMA5.1 and CsHMA5.2, respectively. V – the rate of Cu transport (nmol Cu x mg-1 protein x h-1).

FIGURE 9. The regulation of CsHMA5.1 and CsHMA5.2 in cucumber roots under different copper availability. A. The level of CsHMA5.1 and CsHMA5.2 transcripts in roots of 2-week-old cucumbers grown under copper excess or upon copper deficiency. Data represent means ± SD. The letters indicate significant difference between CsHMA5.1 or CsHMA5.2 expression under different Cu treatments (a) or between CsHMA5.1 and CsHMA5.2 expression under the same treatment (b). B. Western blot analysis of CsHMA5.1 and CsHMA5.2 proteins level in tonoplast isolated from roots of cucumbers grown under different Cu treatments. Immunoblot of the same tonoplast fractions was probed with anti-PPase antibodies (vacuolar pyrophosphatase, V-PPase) to ensure equal loading of membrane protein onto SDSPAGE. C. ATP-dependent copper transport into tonoplast vesicles isolated from roots of the same plants. Data represent means ± SD. The letters (a) indicate significant difference between the active vacuolar copper accumulation under different Cu treatments.

17


FIGURE 8. Effect of CsHMA5.1 and CsHMA5.2 expression in yeast. A. Subcellular localization of the CsHMA5.1-GFP or CsHMA5.2-GFP fusion proteins in yeast. (1) Differential interference contrast (DIC) microscopy of the cells expressing CsHMA5.1-GFP or CsHMA5.2-GFP; (2) Overlay: DIC and GFP fluorescence of the same cells; (3) Overlay: DIC and FM4-64 fluorescence of the same cells; (4) the green (for GFP) and red (for FM4-64) fluorescence gives yellow co-localization in merged images. Scale bar represents 5 μm. B. Copper and silver sensitivity of yeast strains expressing CsHMA5.1-GFP and CsHMA5.2-GFP. S. cerevisiae mutant Δace1 was transformed with the empty vector pUG35, pUG35CsHMA5.1 or pUG35-CsHMA5.2. The serial dilutions (from left to right in each panel) of yeast cultures were spotted on SC/Glu medium supplemented or not (control) with 50 µM CuCl2 or 15 µM AgNO3. C. Copper accumulation by the S. cerevisiae strain Δace1 transformed with empty vector pUG35 or vectors carrying CsHMA5.1 or CsHMA5.2. Data presented are means ±SD (n = 3). Different letters indicate significant differences (P < 0.05) between copper uptake determined in yeast transformed with the empty vector and yeast expressing cucumber genes (a) or between the cells expressing CsHMA5.1 or CsHMA5.2 (b).


Figure 1


18


Figure 2


19


Figure 3


20

Characterization of copper ATPases CsHMA5.1 and CsHMA5.2 from cucumber Figure 4


21


Figure 5


22


Figure 6


23



24


Figure 8


25



26

Plant Biology: Functional and Biochemical Characterization of Cucumber Genes Encoding two Copper ATPases CsHMA5.1 and CsHMA5.2

J. Biol. Chem. published online May 11, 2015

Access the most updated version of this article at doi: 10.1074/jbc.M114.618355 Find articles, minireviews, Reflections and Classics on similar topics on the JBC Affinity Sites. Alerts: • When this article is cited • When a correction for this article is posted Click here to choose from all of JBC's e-mail alerts This article cites 0 references, 0 of which can be accessed free at http://www.jbc.org/content/early/2015/05/11/jbc.M114.618355.full.html#ref-list-1


Magdalena Migocka, Ewelina Posyniak, Ewa Maciaszczyk-Dziubinska, Anna Papierniak and Anna Kosieradzka

Molecular and biochemical properties of two P1B2-ATPases, CsHMA3 and CsHMA4, from cucumber.

Localization of two genes encoding plasma membrane Ca2(+)-transporting ATPases to human chromosomes 1q25-32 and 12q21-23.

Biochemical characterization of cucumber green mottle mosaic virus ribonucleic acid.

Genes Encoding Cucumber Full-Size ABCG Proteins Show Different Responses to Plant Growth Regulators and Sclareolide.

HMA1 and PAA1, two chloroplast-envelope PIB-ATPases, play distinct roles in chloroplast copper homeostasis.

Isolation and characterization of human thioredoxin-encoding genes.

Characterization and mapping of human genes encoding zinc finger proteins.

Single arginine mutation in two yeast isocitrate dehydrogenases: biochemical characterization and functional implication.

Transporters, chaperones, and P-type ATPases controlling grapevine copper homeostasis.

Torsin ATPases: structural insights and functional perspectives.

Biochemical and functional characterization of Plasmodium falciparum GTP cyclohydrolase I.

Biochemical and functional characterization of Plasmodium falciparum DNA polymerase δ.

Characterization of two genes encoding Bacillus thuringiensis insecticidal crystal proteins toxic to Coleoptera species.

Characterization of two genes encoding distinct transferrin-binding proteins in different Actinobacillus pleuropneumoniae isolates.

Transformation of pickling cucumber with chitinase-encoding genes using Agrobacterium tumefaciens.

Isolation and characterization of two Saccharomyces cerevisiae genes encoding homologs of the bacterial HexA and MutS mismatch repair proteins.

Identification of Two Conserved Residues Involved in Copper Release from Chloroplast PIB-1-ATPases.

Cloning and Functional Characterization of Two BTB Genes in the Predatory Mite Metaseiulus occidentalis.

Identification and functional characterization of two Bcl-2 family protein genes in Zhikong scallop Chlamys farreri.

Identification and functional characterization of a novel ferritin subunit from the tropical sea cucumber, Stichopus monotuberculatus.

Transformation of cucumber tissues by microprojectile bombardment: identification of plants containing functional and non-functional transferred genes.

Expression and functional analysis of the transcription factor-encoding Gene CsERF004 in cucumber during Pseudoperonospora cubensis and Corynespora cassiicola infection.

Molecular Characterization and Functional Analysis of Cytochrome b5 Reductase (CBR) Encoding Genes from the Carotenogenic Yeast Xanthophyllomyces dendrorhous.

Identification and functional characterization of genes encoding omega-3 polyunsaturated fatty acid biosynthetic activities from unicellular microalgae.