Vol. 168, No. 3, 1990 May 16, 1990

OLIGOMERIC

BIOCHEMICAL

AND BIOPHYSICAL RESEARCH COMMUNICATIONS Pages 1157-1162

STRUCTURE OF H+-TRANSLOCATING INORGANIC PYROPHOSPHATASE OF PLANT VACUOLES

Masayoshi MAESHIMA Institute

of Low Temperature Science, Hokkaido University,

Received April

Sapporo 060, Japan

6, 1990

The topography and oligomeric structure of the vacuolar membrane-bound inorganic pyrophosphatase (73,000 daltons) of mung bean were studied. When the vacuolar membraneswere treated with thiocyanate or sodium carbonate which are known to remove the peripheral membraneproteins, the enzyme could not be detected in the solubilized fraction by the specific antibody. The apparent molecular size of the enzyme was estimated to be about 480 kDa by polyacrylamide gel electrophoresis in the presence of Triton X-100. Crosslinking treatment of the pyrophosphatase with dimethyl suberimidate produced a complex corresponding to the dimer. The rate of PP. hydrolysis showed a sigmoidal relationship to substrate concentration wit& a Hill coefficient of 2.5. These results suggest that the vacuolar pyrophosphatase is an integral membraneprotein and functions as an oligomer, probably a dimer. 01990 Academic Press,

Inc.

The vacuolar inorganic

pyrophosphatase (EC, 3.6.1.1,

a proton pumpwith the reaction is

purified a

being coupled with the hydrolysis

responsible for generating an internal

and a proton

gradient

of 73 kDa (2).

cells

(1,7).

understand the relationship

protein,

this

Recently

the

the

concerning the topology

the

role

in

in

the

of this new proton pump is needed to

between the structure

structure

vacuole

is very simple like

and its

function.

work, the vacuolar PPase was shown to be an integral

and the oligomeric

and

enzyme was

Vacuolar PPase plays an important

structure

as

and demonstrated to consist of

constituent

Biochemical information

membrane and the higher-order

In

Its

of PPi,

environment in

across the membrane(1).

plasma membraneH+-ATPase (5,6). plant

acidic

from mung bean (2) and red beet (3,4),

single polypeptide

PPase) functions

of the purified

membrane

enzyme was analyzed

in

various experiments. 0006-291X00$1.50 1157

Copyright 0 1990 by Academic Press, Inc. All rights of reproduction in any form reserved.

Vol.

168, No. 3, 1990

BIOCHEMICAL

AND BIOPHYSICAL

RESEARCH COMMUNICATIONS

MATERIALS AND METHODS Plant material. Seeds of mung bean (Vigna radiata) were imbibed with water and allowed to germinate in the dark at 26°C for 3.5 days. Hypocotyls were used. Enzyme purification. The vacuolar membraneswere prepared by differential and floating centrifugations (2). The membraneswere treated with 0.3% sodium deoxycholate in 50 mMKC1 to remove some peripheral proteins. The vacuolar PPase was solubilized with 0.4% lysophosphatidylcholine and purified by double QAE-Toyopearl column chromatography (2). Measurements. The activities of PPase (2), the vacuolar ATPase (8) and catalase Protein content was (9) were assayed as described previously. determined by the method of Lowry et al. (10). Immunoblotting. Immunoblotting was performed as described previously (2) by a modified version of the method of Towbin et al. (11). The antibody that reacted with the antigen on a nitrocellulose filter was detected using horseradish peroxidase-linked protein A. Gel electrophoresis on a 12% Polyacrylamide gel electrophoresis. polyacrylamide gel or a 5-15% gradient gel containing 0.1% SDS was carried out by the method of Laemmli (12). Polyacrylamide gradient gel electrophoresis was done in the presence of 0.1% Triton X-100 or 0.1% Lubrol PX in a 4-15% linear gradient gel by a modified version of the method of Tomida et al. (13). Instead of nonaethyleneglycol dodecyl ether, Triton X-100 or Lubrol PX was added to the gel and electrode buffers. MgSOCros;-linking. The purified PPase was dialyzed against 30 mMKCl, 2 mM 5, glycerol and 0.1% Triton X-100. The enzyme (20 pg) was mixed with 0.7 4& of 0.2 M potassium phosphate buffer, 1 mM pH 8.2, containing dithiothreitol, 1 mMMgS04, 10%glycerol, 20 mMtriethanolamine and 37 mM dimethyl suberimidate. After incubation at 25°C for 1 hr, 70 ~1 of 1 M lysine was added to stop the reaction, and the same volume of cold 50% trichloroacetic acid was added to precipitate the proteins. The precipitate was washed with 10%trichloroacetic acid and acetone, and dissolved in the dissociation buffer for SDS/polyacrylamide electrophoresis.

RESULTS AND DISCUSSION The vacuolar PPase which consists of a polypeptide to

The present work offered

membraneprotein.

evidence that the PPase is

vacuolar 1).

hydrophobic released observation the

ATPase was recovered in both the

the multi-subunit

enzymes.

precipitate

the

Recent papers have reported the

membraneby treatment with SCN-'

agrees with these reports.

ability

to

that

the

68-kDa subunit, (14,15).

On the other hand, in

vacuolar PPase was detected only in the precipitate,

PPase is associated directly

and supernatant

anion which has the

complex of vacuolar ATPase, including

from

were

the major subunit (68-kDa subunit) of

SCN-1 is known to be a caotropic

dissociate

an integral

When the vacuolar membranesfrom mung bean hypocotyls

treated with 0.5 M KSCNand centrifuged,

(Fig.

expected

span the vacuolar membrane, since it operates as a proton-translocating

machinery.

the

of 73 kDa is

The present immunoblotting,

suggesting that

with the membraneby its hydrophobic part. 1158

was

the Other

Vol.

168, No. 3, 1990

BIOCHEMICAL

AND BIOPHYSICAL

234567

1

RESEARCH COMMUNICATIONS

100

2

50

E z

0

m a loo .z z z a 50

0

1

gel

0

0

5 Fraction

2

immunoblot

10

15

number

Figure 1. Treatment of the vacuolar membrane with KSCN. The vacuolar membrane fraction (2 mg/ml) was mixed with the same volume of 1 M KSCN dissolved in 20 mM Tris/acetate, pH 7.5, and incubated at 4'C for 30 min. After were centrifugation at 170,OOOg for 40 min, the precipitate and supernatant subjected to SDS/polyacrylamide gel electrophoresis. Lane 1, vacuolar membrane; lanes 2, 4 and 6, precipitate; lanes 3, 5 and 7, supernatant. Lanes 1-3, Coomassie blue-stained gel. Lanes 4 and 5, immunoblot with the antibody to the largest subunit (68-kDa subunit) of vacuolar ATPase. Lanes 6 and 7, immunoblot with the antibody to the vacuolar PPase. The arrowheads (a and b) indicate the vacuolar PPase and the 68-kDa subunit of ATPase, respectively. Figure 2. Glycerol density gradient centrifugation. The solubilized fraction of vacuolar membranes by lysophosphatidylcholine (A) and the purified PPase 20 mM to 15-ml linear glycerol gradients containing (B) were applied Tris/acetate, ";,,I,~~,~,~ ~f%&'(y di'h~~~~~~~~~v~n~c~~~as~d(so~03~ Triton X-100. 28eFL The gradients 11.30) were mixed with the enzyme solut%"is standards. centrifuged at 80,OOOg for 45 hr at 4'C, and then divided into 0.8-ml The activities of PPase (O), vacuolar ATPase (0) and catalase fractions. and the amount of serum albumin (A) are expressed as the percentages (0) relative to those in the peak fractions.

treatments

such

as sonication

mM Na2C03

failed

to release

previously

(2),

described of bile

salt,

has a very

findings

show that

alkaline

the PPase

the PPase

is

or Tween

80.

X-100

and

activity

These

Triton

under

hydrophobic the

condition

from not

and incubation

the membranes solubilized

(not

domain

in

vacuolar

PPase

profile

of the

its

is

As

concentration

phospholipid

amino-terminal

a typical

100

shown).

by a low

The enzyme requires

in

for

part

integral

(2).

membrane

protein. Fig. density PPase

2 shows gradient

sedimented

the

activity

centrifugation slightly

faster

in the than

presence the

1159

bovine

vacuolar

PPase

of 0.03% serum

Triton

albumin

after

glycerol X-100.

(67 kDa).

The This

BIOCHEMICAL

Vol. 168, No. 3, 1990

AND BIOPHYSICAL

RESEARCH COMMUNICATIONS

suggests a monomeric form for PPase based on the assumption that

the

enzyme

contains only small amounts of detergents and/or lipids. Polyacrylamide of detergent faster

gave a single,

in Triton

the migration in

gel electrophoresis

PPase in the

sharp band as shown in Fig. 3.

presence

The PPase migrated

X-100 than in Lubrol PX, although there was no difference

rate of the marker proteins

in

Difference

between the two systems.

the size of PPase between the two systems may be due to the difference

the

bound detergent.

amount of

calculated

massesof micelles

and 64 kDa, respectively much larger

(16).

gradient

kDa was observed

in addition

the

property

PPi

coefficient

vacuolar

PPase functions Cross-linking

dimethyl

suberimidate

to the 73-kDa band (Fig.

hydrolysis

is

a

SDS/polyacrylamide

This

4).

showed a sigmoidal and the Hill

relationship

coefficient

158

finding

was 2.0 oligomeric

study using the purified

(not

shown).

(dimeric)

translocation The allosteric

enzyme, I propose that

the

vacuolar

73-kDa subunit.

enzyme suggests a dimeric form for

as an enzyme-detergent complex, a large

PPase.

3) and in the apparent partial

Since

the functional

specific

size

volume of the enzyme (Fig.

form of the plasma membraneATPase which consists 1160

As

amount of

detergent bound to the enzyme causes the marked increase in the apparent (Fig.

the

structure,

in the membraneas an oligomer comprised of of the purified

to

was 2.4 (Fig.

for the rate of PPi-dependent proton

membrane vesicles

vacuolar PPase exists

which

for PPase.

of PPase also supports its

From the

the

of

with

(PPi plus Mg2+) concentration

The Hill

a

PPase, the

a broad band with a molecular mass of about

suggests a dimeric structure

5).

were

the PPase had been composedof

When the products were subjected to

gel electrophoresis,

substrate

experiment

(73 kDa).

reagent.

The rate

The

90 kDa

X-100 and Lubrol PX are about

The values obtained in this

PPase was cross-linked

bifunctional

PPase was

to determine the subunit number of the functional

order

purified

of Triton

in

X-100 or 600 kDa in Lubrol PX.

than would have been expected if

single polypeptide In

The apparent molecular mass of

to be about 480 kDa in Triton

molecular

of

of the purified

2). of

a

Vol.

166, No. 3, 1990

BIOCHEMICAL

AND BIOPHYSICAL

RESEARCH COMMUNICATIONS

10 6-

4-

2-

-1-

V

Vmax- V

2320.4 -

0.2 -

-

0

67-

0.11 0.1

5

Gl

Lubrol

PX

Triton

X-100

S

0.2tmM)

0.4

Figure 3. Polyacrylamide gradient gel electrophoresis in the presence of detergent. Electrophoresis was done in 4-15% gradient gel containing 0.1% Lubrol PX (lanes 1 and 2) or 0.1% Triton X-100 (lanes 3 and 4). The gel was stained with Coomassie blue. Thyroglobulin (669 kDa), ferritin (440 kDa), catalase (232 kDa), lactate dehydrogenase (140 kDa) and bovine serum albumin (67 kDa) were used as standard proteins (lanes 1 and 3). Lanes 2 and 4, purified PPase. Figure 4. Gel electrophoresis of the vacuolar PPase after cross-linking. The purified enzyme was cross-linked for 1 hr at 25'C with dimethyl suberimidate as described in "Materials and Methods." Samples were separated in a S-15% gradient Laemmli gel. Lane 1, purified PPase; lane 2, cross-linked product. Molecular masses (kDa) of standards are given on the left. Hill analysis of the dependence of PPase activity on substrate Figure 5. concentration. The reaction mixture contained 30 mM Tris/Mes, pH 7.2, 50 mM KCl, 0.02% Triton X-100, 1 mM sodium molybdate, and equal concentrations of PPi and MgS04 as indicated. Vmax was 23 nmolfmin.

single

polypeptide

topography primary

of about

of vacuolar structure

proton-translocating

100 kDa was thought

PPase may be similar of PPase needs enzymes

which

to be that

to the

to be determined have

been studied

plasma

of a dimer membrane

to compare at the

it

(5),

the

ATPase.

The

with

molecular

other level.

ACKNOWLEDGMENTS. This study was supported by Grants-in-Aid for Scientific Research (No. 01560080) and Scientific Research on Priority of "Bioenergetics" from the Ministry of Education, Science and Culture of Japan. REFERENCES 1. Boller, T., and Wiemken, A. (1986) Annu. S. (1989) J. Biol. 2. Maeshima, M., Yoshida, 1161

Rev. Plant Physiol. 37, Chem. 264, 20068-20073.

137-164.

0.6

Vol.

3. 4. 5. 6. 7. 8. 9. 10. 11. 12. 13. 14. 15. 16.

168, No. 3, 1990

BIOCHEMICAL

AND BIOPHYSICAL

RESEARCH COMMUNICATIONS

Sarafian, V., and Poole, R.J. (1989) Plant Physiol.91, 34-38. Britten, C.J., Turner, J.C., and Rea, P.A. (1989) FEBSLett. 256, 200-206. Bowman,B.J., and Bowman,E.J. (1986) J. Membrane Biol. 94, 83-97. Serrano, R. (1988) Biochim. Biophys. Acta 947, l-28. Maeshima, M. (1990) Plant Cell Physiol. 31, (in press). Matsuura-Endo, C., Maeshima, M., and Yoshida, S. (1990) Eur. J. Biochem. 187, 745-751. Luck, H. (1965) in Methods of Enzymatic Analysis (Bergmeyer, H.U., ed. 1 pp.885-894, Acadexc Press, New York. Lowry, O.H., Rosebrough, N.J., Farr, A.L., and Randall, R.J. (1951) J. Biol. Chem. 193, 265-273. Towbin, H., Staehlin, T., and Gordon, J. (1979) Proc. Natl. Acad. Sci U.S.A. 76, 4350-4354. Laemmli, U.K. (1970) Nature 227, 680-683. Tomida, M., Kondo, Y., Moriyama, R., Machida, H., and Makino, S. (1988) Biochim. Biophys. Acta 943, 493-500. Moriyama, Y., and Nelson, N. (1989) J. Biol. Chem. 264, 3577-3582. Parry, R.V., Turner, J.C., and Rea, P.A. (1989) J. Biol. Chem. 264, 2002520032. Hjelmeland, L.M. (1986) Methods Enzymol. 124, 135-164.

1162

Oligomeric structure of H(+)-translocating inorganic pyrophosphatase of plant vacuoles.

The topography and oligomeric structure of the vacuolar membrane-bound inorganic pyrophosphatase (73,000 daltons) of mung bean were studied. When the ...
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