Vol. 75, No. 1, 1977

BIOCHEMICAL

AND BIOPHYSICAL RESEARCH COMMUNICATIONS

PHOSPHORYLATION OF NUCLEAR MATRIX PROTEINS IN ISOLATED REGENERATING RAT LIVER NUCLEI Steven

L. Allen,

Department

Ronald

Berer.ney*

of Pharmacology

Reproductive

The Johns

December

Therapeutics,

Laboratory

and the Oncology

University

Baltimore, Received

Brady

Biology,

Hopkins

S. Coffey

and Experimental

The James Buchanan for

and Donald

School

Maryland

Center

of Medicine

21205

13,1976

Summary. The phosphorylation of nuclear matrix proteins from normal and regenerating rat liver nuclei was examined using an --in vitro system of isolated nuclei and Y-~~P-ATP. Phosphorylation of the nuclear matrix proteins was 2-3 fold higher than that of the total nuclear proteins in normal nuclei. The level of phosphorylation of the matrix proteins was enhanced an additional three fold at a period in liver regeneration (12 hours) just preceding the onset of DNA synthesis. Recently, liver

we reported

nuclei

proteins

(1).

with

The nuclear

daltons

Upon investigating we reported

that

the nuclear

matrix

synthesis. in these matrix

*

Present

isolation

over

90% of newly

may be involved

processes. proteins

address:

fractions

intranuclear

(2).

Specific

consists

and represents the

This

regard,

largely

site

than

10% of the

synthesized that

DNA is this

weight total

residual

we have

phosphorylation

--in

determined vitro

rat

nuclear

of proteins.

in regenerating

nuclear

with

structural such as DNA

proteins the

liver,

associated

may be involved

ability

of these

in the presence

Division of Cell and Molecular Biology, State of New York, Buffalo, New York 14214.

Copyright 0 1977 by Academic Press, Inc. All rights of reproduction in any form reserved.

range

functions

matrix

from

nonhistone

initially

of nuclear

of the nuclear

matrix

of acidic

of DNA replication

in the regulation

In this

protein

in the molecular

less

suggests

modifications

to undergo

of a nuclear

matrix

3 main polypeptide

60,000-70,000

framework

the

of y-

32

nuclear P-ATP.

University

111 ISSN

0006-291X

Vol. 75, No. 1, 1977

Much interest phosphorylation function

in recent of acidic

BIOCHEMICAL

years

AND BIOPHYSICAL

has been focused

nonhistone

proteins

RESEARCH COMMUNICATIONS

on the possible in

the regulation

role

of the

of nuclear

(3,4,5). MATERIALS

AND METHODS

Male Sprague-Dawley rats (400-450 g) underwent partial hepatectomy by surgical removal of 213 of the liver following the methods of Higgins and Anderson (6). Animals were maintained in a controlled light environment and surgery was carried out under ether anesthesia between 8-10 a.m. Liver nuclei were isolated through high molarity sucrose by the procedure of Berezney and Coffey (1). The isolated nuclei were phosphorylated by incubation with y- 32 P-ATP utilizing a modification of the method of Johnson --et al. (7). Incubations were carried out at 37" C for 5 minutes in 6 ml containing: 3 x 10m8 moles Y-~~P-ATP (5OpCi); 5 mM MgC12; 115 mM NaCl; 30 mM Tris-HCl, pH 7.4 with the addition of nuclei equivalent to 60 mg of total nuclear protein. The reaction was terminated b the addition of 6 ml of the reaction buffer at 4°C containing 6 mM ATP. The 3I P labeled nuclei were isolated and washed 3 times by centrifugation at 780 x g for 15 minutes. The labeled nuclei were then processed for the isolation of the nuclear matrix proteinsas described by Berezney and Coffey (1). The final step for the removal of tightly bound RNA and DNA employing nuclease digestion was omitted since SDS-acrylamide gel electrophoresis demonstrated no measurable difference in the polypeptide pattern before or after nuclease action. The nuclear pellet was subjected to the following extractions which were carried out at 4'C in 10 ml solutions containing 10 mM Tris buffer pH 7.4: (A) Three extractions with 0.2 mM MgC12 for 10 min. followed by centrifugation at 780 x g for 30 min; (B) Three extractions with 2 M NaCl containing 0.2 mM MgC12 for 10 min. followed by centrifugation at 780 x g for 60 min.; (C) 1% Triton X-100 in 5 mM MgC12 for 10 min. followed by centrifugation at 780 x g for 30 min. and two washes with 0.25 M sucrose, 0.05 mM Tris, pH 7.4 containing 5 mM MgC12. Protein bound phosphate was isolated by modification of the procedures of Kleinsmith Removal of the nuclear lipid was not necessary since --et al. (8). initial experiments revealed that extraction with chloroform:methanol (2:l; v:v) did not remove 32P-containing material from the pellet. Nucleic acids were removed by the method of Munro and Fleck (9). The fractions were precipitated with 0.2 E PCA on ice for 10 minutes. After centrifuging at 27,000 x g for 10 minutes the pellets were washed two additional times in 0.2 E PCA and then The samples were resuspended in 0.8 N PCA and heated at 70°C for 20 minutes. cooled on ice, centrifuged at 27,000 x g, and dried with 10 ml of cold ether. the pellets were heated at 100°C for 15 To release protein bound phosphate, minutes in 0.5 ml of 18 NaOH, cooled and then 0.49 ml of 70% perchloric acid was added to yield a final concentration of 0.2 g PCA. The suspensions were centrifuged at 27,000 x g for 10 minutes and the supernatants analyzed for inorganic phosphate by the method of Chen et al. (10). Radioactivity was determined by liquid scintillation counting in 10 ml of Hydromix (Yorktown Research Inc.). Protein was determined by the Lowry assay (11). SDS (sodium dodecyl sulfate) acrylamide gel electrophoresis was performed according to the procedure of Weber and Osborn (12) and consisted of 10% acrylamide gels in 0.1% SDS, 0.05 M Tris, pH 7.4 which were run at 4 ma per gel with a solution of 0.1% SDS, 0.05 M Tris, pH 7.4 in both lower and upper chambers.

112

2

Standard

Averages

error

of five

Nuclei

Proteins

3.57

5.73

involving

100 2 1.84

5 0.97

between

pooled

of Total Protein (z>

100

of differences

experiments

of the mean Significance

individual

Protein Proteins

Liver

Total Nuclear Nuclear Matrix

Regenerating (12 hours)

Matrix

Protein

Nuclei

Nuclear

Liver

Nuclear

Total

Normal

Percent Nuclear

groups:

liver

5

9 6

4 rats

per

AvsB 4 0.005 E vs F 4 0.05 C vs D C 0.025 G vs H C 0.05

from

68+ 67+

70 +_ 24

73+

x lo5

(mg PO4/mg Protein)

Total Phosphate in Protein

PROTEINS

+ 1.13 + 9.40

+ 1.07

+ 0.41

AvsE CvsG BvsFc DvsHc

C 0.005 C 0.05 0.05 0.10

(E) (F)

(B)

(A)

32P04/mg

determination.

8.20 30.94

8.46

4.01

Protein)

(ppmole

Specific Activity of Protein

PHOSPHORYLATION OF TOTAL NUCLEAR AND NUCLEAR MATRIX

TABLE I

x 10

4

32P04/mg

4.25 13.81

5.15

2 1.12 + 3.66

+_ 1.39

1.60 +_ 0.18

(mg

(G) (H)

(D)

(c)

PO4)

Specific Activity of Phosphate

H

c za G m 9

5 9 2

:

c

3

,’

s v

5 .

.i

< 0

Vol. 75, No. 1, 1977

BIOCHEMICAL

AND BIOPHYSICAI. RESEARCH COMMUNICATIO’QS

T

X PROTEIN 2 HRREGENRmM LIVER

SPECIFIC ACTPill

SPECIFIC KTIL NoRk(pL LIVER

16

ri N

32 of isolated nuclei and 7- P-ATP phosphorylation specific activity of the total nuclear proteins isolated nuclear matrix proteins (M). Data are normal liver nuclei and nuclei isolated 12 hours partial hepatectomy.

FIGURE 1.

the resulting (N) and the presented for following

Samples for electrophoresis were dissolved as lyophylised powders in 5% SDS, 0.05 M Tris, pH 7.4 containing 2% $-mercaptoethanol by heating at 70°C for 20 min. followed by incubation at room temperature for three hours. RESULTS AND DISCUSSION --In vitro 12 hour with if

phosphorylation

regenerating

normal

rat

the specific

protein

approximately

nuclear

nuclei

was 2*3 fold

liver

unit

This

phosphate nuclear

liver

nuclei.

5% of the

total

(Table matrix

The matrix

higher

as incorporation

I,

Fig.

1).

After

were

isolated

matrix

proteins

proteins,

however,

114

that

proteins

per

observed

unit

amount

phosphorylation

from both

normal

represent essentially

as was observed were

in

and was observed

--in vitro

and contained

per mg of protein

protein

than

either

The recovered

residues

nuclear

was significant

proteins

nuclear

total

difference

was expressed

of phosphate

proteins.

32 P-ATP of the

nuclei.

nuclei,

and regenerating

same amount

liver activity

or per

the isolated

rat

by y-

differentially

the in the

total

phosphory-

of of

BIOCHEMICAL

Vol. 75, No. 1, 1977

AND BIOPHYSICAL

RESEARCH COMMUNKATIONS

am.

-A.-&43-&-$?--o--$?‘E---S

RI

IO

Radioactivity isolated from hepatectomy. on 100 pg of

FIGURE 2.

lated

in both

higher

than

protein

normal total

and regenerating

nuclear

was markedly

from both 2).

which

corresponded

in the nuclear the

during

specific

matrix nuclear

by a factor

(I.);

comparable matrix

labeled

proteins

high (l), matrix

molecular the resolution polypeptides

115

(Fig.

solubilized

nuclear

which

of the nuclear

regeneration

of the

reported

the phosphate

protein

liver

electrophoresis

to the major

nuclei

Phosphorylation

and regenerating

Although

(Fig.

identify

gel

as previously

normal

liver

proteins.

inoreased

SDS acrylamide was performed

associated with the nuclear matrix proteins normal livers and 12 hours following partial SDS acrylamide gel electrophoresis was performed protein according to Beresney and Coffey (4).

were

weight

proteins

of protein

on each gel in the Rf zones

proteins

was not

matrix

(100 pg)

resolved

appeared

matrix

1).

nuclear

amounts

was 2-3 fold

previously

sufficient

phosphorylated.

A-C, identified

to definitively

Vol. 75, No. 1, 1977

A time

study

regenerating partial

14-16

hours

by ATP was performed

newly

replicated

in regenerating

of specific

reviewed

preceded

hepatectomy.

was not measured

proteins in the the

in

(2),

of the nuclear regulation

isolation,

in vitro

these

liver

is

in

alt 12 hours

of DNA synthesis

important

to note

and that

the extent

which

that

ooour?

the

of dephos-

experiments.

it

is

associated

is

conceivable

matrix

preceding

of DNA synthesis

structure

protem

of phosphorylation

the onset It

DNA in vivo

rat

of the nuclear

a maximum level

This

partial

AND BIOPHYSICAL RESEARCH COMMUNICATIONS

of phosphorylation

demonstrated

after

phorylation

importance

onset

hepatectomy.

phosphorylation

matrix

of the

liver

after

Since

BIOCHEMICAL

with

the isolated

that this

and functions

the phosphorylation

event

in the nucleus. of the nuclear

nuclear

could

be of

We have recently protein

matrix

Grant

&13745.

(13).

ACKNOWLEDGEMENTS This

work

was supported

by the National

Cancer

Institute,

REFERENCES 1. 2. 3. 4. 5. 6. 7.

8. 9. 10. 11. 12. 13.

Berezney, R. and Coffey D.S. (1974) Biochem. Biophys. Res. Comm. 60, 14101417. Berezney, R. and Coffey, D.S. (1975) Science 189, 291-293. Kleinsmith, L. (1975) J. Cell Physiol. 85, 459-476. Stein, G.S., Spelsberg, T.C. and Kleinsmith, L. (1974) Science 183, 817824. Allfrey, V.G., Inoue, A., Kain, J., Johnson, E.M. and Vidali, G. (1974) Cold Spring Harbor Symp. Quant. Biol. 38, 785-801. Higgins, G.M. and Anderson, R.M. (1931) Arch. Pathol. l2, 186-202. Johnson, E.M., Vidali, G., Littan, V.C., and Allfrey, V.G. (1973) J. Biol. them. 248, 7595-7600. Kleinsmith, L., Allfrey, V.G. and Mirsky, A.E. (1966) Proc. Natl. Acad. Sci. 55, 1182-1189. Munro, H.N. and Fleck, A. (1965) Meth. Biochem. Anal. 14, 113-176. Toribara, T.Y. and Warner, H. (1956) Anal. Chem. 28, 1756-1758. Chen, P.S., Lowry, O.H., Rosenbrough, N.J., Farr, A.L., and Randall, R.J. (1951) J. Biol. Chem. 193, 265-275. Weber, R. and Osbom, M. (1969) J. Biol. Chem. 244, 4406-4412. Berezney, R. and Coffey, D.S. (1976) Adv. Enzyme Reg. 2, 63-100.

116

Phosphorylation of nuclear matrix proteins in isolated regenerating rat liver nuclei.

Vol. 75, No. 1, 1977 BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS PHOSPHORYLATION OF NUCLEAR MATRIX PROTEINS IN ISOLATED REGENERATING RAT LI...
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