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Journal of Alzheimer’s Disease xx (20xx) x–xx DOI 10.3233/JAD-140399 IOS Press

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Short Communication

Previously Unrecognized Missense Mutation E126K of PSEN2 Segregates with Early Onset Alzheimer’s Disease in a Family

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Ulrich M¨ullera,∗ , Pia Wintera , Claus Bolenderb and Dagmar Noltea

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a Institute

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b Gemeinschaftspraxis,

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Handling Associate Editor: Luisa Benussi

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of Human Genetics, Justus Liebig University, Giessen, Germany Schl¨uchtern, Germany

Accepted 25 March 2014

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Keywords: Alzheimer’s disease, early onset Alzheimer disease, E126K PSEN2 mutation, familial segregation, PSEN2

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INTRODUCTION

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Early onset Alzheimer’s disease (EOAD) with an age of onset A) in PSEN2 in an EOAD patient and her likewise affected mother. This change results in the exchange of amino acid glutamic acid (E) by lysine (K) at position 126 of the protein (p.E126K). Pathogenicity of the mutation is shown by segregation with disease, evolutionary conservation of E126, and in silico analysis of the mutation.

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∗ Correspondence

to: Prof. Dr. med. U. M¨uller, Institut f¨ur Humangenetik, Schlangenzahl 14, 35392 Giessen, Germany. Tel.: +49 641 99 41600; Fax: +49 641 99 41609; E-mail: [email protected].

and the generation of peptides of 39–42 amino acids (amyloid-␤ (A␤)1-39 - A␤1-42 ) with A␤1-40 being the most common. In addition to either presenilin 1 or presenilin2, ␥-secretase is composed of the integral membrane proteins nicastrin, APH-1 (anterior pharynx-defective 1), and PEN2 (presenilin enhancer 2) [1]. Mutations in PSEN1 or PSEN2 increase production of highly amyloidogenic A␤1-42 . APP codes for A␤PP and mutations including point mutations, duplications, and deletions also increase generation of A␤1-42 . Mutations in PSEN1 are most common in familial EOAD (30%–70% of cases). APP and particularly PSEN2 mutations are much less frequent, amounting to 10%–15% and A transition at position 376 of the coding sequence (c.376G>A; cDNA.812G>A). This nucleotide change results in the substitution of the amino acid glutamic acid (E) by lysine (K) at position 126 of the protein (p.E126K). The mutation is located in a region of exon 6 of PSEN2 that encodes part of the first hydrophilic loop (HL-I) of the protein. Numerous findings are consistent with pathogenicity of this mutation: 1) The c.376G>A mutation co-segregates with the disorder; 2) The exchange has not been found in controls and is not listed in common variant databases (1000 genomes, dbSNP, Exome Variant Server); 3) In silico analysis using the MutationTaster tool (http://www.mutationtaster.org; [3]) predicts the disease causing nature of the p.E126K change with a high security score. Furthermore a PolyPhen-2 analysis (http://genetics.bwh.harvard.edu/pph2/; [4]) classifies the exchange as “probably damaging” as well with the highest possible score of 1.0. Substitution of the positively charged glutamic acid by the negatively charged lysine makes an effect on structural and functional integrity of the protein likely; and 4) The mutation affects an evolutionarily highly conserved amino acid (Fig. 2) suggesting an important function of E126 within HL-I.

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U. M¨uller et al. / Previously Unrecognized Missense Mutation E126K of PSEN2 Segregates

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Fig. 1. Pedigree of the family. The index patient is marked by arrow. Sequencing chromatograms are given of both strands (A, forward; B, reverse) of exon 6 of the index patient’s and her mother’s PSEN2 gene.

Fig. 2. Evolutionary conservation of E126 of PSEN2 orthologs. Protein identifier numbers are given on the right. The conserved amino acid glutamic acid residue at position 126 is highlighted in red. Nonconserved amino acids are depicted in green.

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Given that only one additional proven pathogenic substitution of an amino acid (threonine at position 122) in a hydrophilic loop of PSEN2 has been found in EOAD patients [21, 22], it is of special interest to compare their phenotypes with those of the present cases. Age of onset of the patients with the previously described mutations in HL-I (p.T122R and p.T122P) had a comparable age of onset as the two molecularly tested members of the present family. Two members of the family with the p.T122R mutation [22] had disease onset at 55 and 57 years of age. Disease onset in the two (unrelated) patients with the p.T122P mutation was 47 and 50 years [21]. The phenotype of members of the family carrying the p.T122R mutation [22] differed remarkably from the present cases (p.E126K) and those carrying the p.T122P mutation. Disease progressed fairly rapidly in one patient of the p.T122R mutation family and he was “unable to speak and bedridden” after a course of five years. His sister with disease onset at 57, however, mainly displayed inAPPropriate behavior and “impairment in non-verbal short- and long-term memory, language comprehension, and verbal fluency with only mild impairment of verbal long-term memory”. A monozygotic twin of this patient was normal except for a “mild deficit of verbal long-term memory” at age 60. In summary, the present report describes a previously unrecognized pathogenic PSEN2 mutation in EOAD. Comparison to other cases carrying mutations of amino acids in HL-1 underlines the great phenotypic variability in patients with PSEN2 mutations. The report also emphasizes that clear genotype-phenotype correlations cannot be established in patients with PSEN2 mutations.

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Presently only 13 definitely pathogenic PSEN2 mutations have been documented (http://www.molgen. ua.ac.be/ADMutations; [5]). Designation of mutations is based on the assumption that the start codon (ATG) is located in exon 3. (It has been recently shown that the start codon is actually located in exon 4 of transcript ENST00000366783). Most of these pathogenic mutations segregated with the disease and result in amino acid substitutions at 11 positions of the protein. Mutations affect 8 amino acids of transmembrane (TM) domains of presenilin 2, i.e., Asn141 [6–8] and Val148 [9] of TM-II; Met174 [10] and Ser175 [11] of TM-III; Gln228 [12], Tyr231 [13], and Met239 [14–17] of TM-V; and Thr430 [18] of TM-IX. Of two additional pathogenic amino acid substitutions, one affected the N-terminal (A85V) [19], the other the C-terminal domain (D439A) [20] of PSEN2. Finally, substitutions of amino acid threonine at position 122 in the HL-I domain were described, i.e., p.T122P [21] and p.T122R [22]. It needs to be emphasized that segregation could not be shown beyond doubt in all cases owing to the high variability in age of onset of patients with PSEN2 mutations. Of note, Jayadev et al. [7] suggested that only seven of the 13 “pathogenic” mutations listed in the database are sufficiently well documented to be considered pathogenic, i.e., mutations of Ala85 (A85V), of Thr122 (T122P, T122R), of Asn141 (N141I), of Met 239 (M239V, M239I), and of Thr430 (T430M). In addition, they identified a two base pair deletion (c.342-343 delGA) that results in premature termination (K115Efx10). The present report demonstrates functional importance of an additional amino acid in hydrophilic domain I of PSEN2, i.e., glutamic acid at position 126. Disease onset of carriers of this mutation was during the end of the fifth decade in the index case and about a decade later (end of sixth decade) in her mother. Although the index patient’s grandmother (I/2) was reported not to have been affected, minor memory loss might not have been noticed by the family. This person’s sister (I/3) was reported to have been demented from age 60 onwards. However, it remains unknown whether there was reduced penetrance in this family (I/1 not affected) or whether disease manifestation was only mild in this patient. In fact, disease onset during the 8th decade has been described in patients with PSEN2 mutations [2]. The wide range of onset in this family is comparable to other cases with PSEN2 mutations. Furthermore, early cognitive impairment and seizures as observed in III/1 are also characteristic findings in patients with PSEN2 mutations.

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ACKNOWLEDGMENTS This work was supported by the Justus-LiebigUniversity Giessen (Germany). Authors’ disclosures available online (http://www.jalz.com/disclosures/view.php?id=2235). REFERENCES [1]

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Previously unrecognized missense mutation E126K of PSEN2 segregates with early onset Alzheimer's disease in a family.

Mutations in the gene PSEN2 are a rare cause of early onset Alzheimer's disease (EOAD). PSEN2 sequence variants are often only found in one patient an...
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