Vol.

183,

March

No.

2, 1992

BIOCHEMICAL

AND

BIOPHYSICAL

RESEARCH

COMMUNICATIONS

16, 1992

Pages

Propidium

iodide stainhg

Tessa Crompton*,

+Institute

Received

cormla~ with the extent of DNA degradation in isolated nuclei

Manuel

*Ludwig

Institute

C. Peitsch+,

23,

H. Rohson MacDonald*

for Cancer Research,

of Biochemistry,

January

532437

University

and Jiirg Tschopp+

1066-Epalinges,

of Lausanne,

Switzerland

1066-Epalinges,

Switzerland

1992

SUMMARY Gradual degradation of internucleosomal DNA is a hallmark of apoptosis and can be simulated by incubating isolated thymocyte nuclei in the presence of 5 mM Mg2+ and 5 mM Ca2+ at 37°C. Staining of nuclei with the DNA binding fluorescent dye propidium iodide (PI) showed that intensity of fluoresence correlated with the extent of DNA degradation. PI fluorescence was increased in the presence of DNase I. Thus it seems that the cleavage of chromatin DNA by DNase 1 or by the endogenous enzyme increases the accessibility of DNA for the dye. No increase of fluorescence was observed in the presence of the known inhibitors of the endogeneous endonuclease: Zn2+ and EGTA. However, the presence of Zn 2+ led to decreased staining of the nuclei by PI and caused a shift in the scatter profile of the nuclei, suggesting that a conformational change of chromatin is induced by this ion. This correlation between intensity of PI staining and DNA degradation should be useful to compare endogenous nuclease levels in lymphocyte populations. 0 1992 Academicpress, 1°C.

Apoptosis developmentally in the murine

has been implicated programmed

as a mechanism

system (1) including

thymus (2-4). DNA degradation,

Ca2+ and Mg2+

dependent

endogenous

clonal deletion

purportedly

endonuclease

To date the measurement

qualitative

of autoreactive

caused by the activation

such as agarose gel electrophoresis of isolated

PI is an intercalating cytometry

for quantative

addition “gate”

the exclusion when analyzing

been recently thymocytes

exploited undergoing

intemucleosomal thymocyte 0006-291X/92 Copyright All rights

cells of a

has relied on

of DNA prepared

from dying

using propidium

nuclei and FACS analysis. DNA-binding

dye that has been widely

cell cycle analysis

of fixed

of PI by living

cells is frequently

heterogeneous

populations.

used in flow

cells and isolated

nuclei.

used to establish

The latter

property

apoptosis

DNA degradation

in response to autoantigens correlates

nuclei.

$1.50 Inc. reserved.

532

quantatively

(7).

In

a viable cell of PI has also

to define the late stages of cell death in populations

0 1992 by Academic Press, oj~ reproduction in any form

of

as a defining

of such DNA fragmentation

eels. Here we present a rapid method to quantify this DNA degradation, iodide (PI) staining

in a variety

(5,6), is regarded

feature of apoptosis. methods

of cell death

of immature

Here we show that

with PI staining

in isolated

Vol.

BIOCHEMICAL

183, No. 2, 1992

Buffers and solutions.

7.5 containing buffer:

40 mM Tris-acetate

was slightly

0.5 mM spermidin

isolation.

pH 8.0 containing The procedure

modified

and applied

Dounce homogeniser

iodide (PI)(Sigma,

for nuclei isolation

The cell suspension

removed with a glass pipette.

5 ml of serum-free

medium

(Dulbecco-MEM)

ice-cold buffer B containing by 5-10 strokes volume white

in a Dounce homogeniser. pellet

same 30 % sucrose concentration

cushion.

of 108 nuclei/ml

DNA degradation

(Dulbecco-MEM)

in 3 ml

and disrupted

were underlayered

with

an equal

for 10 min at 1OOOg. The

in 3 ml buffer A and recentrifuged was resuspended

and kept on ice until used (within

in nuclei.

was performed

1 ml / lo8 thymocytes)

pellet

using a

The cells were resuspended

They

The final

(8)

Cells were washed 2 times in

30 % sucrose and centrifuged

was resuspended

and Burgoyne

and the last centrifugation

10 % sucrose.

0.05 % NP-40 (approx.

of buffer A containing nuclear

TAE

was put on ice for 10 min and

material

2 ml of buffer A containing

of Hewish

medium

coarse particulated through

St-Louis).

pH

A thymus was collected from a 4-6 weeks

in 5 ml serum-free

(pestel B).

Buffer

Buffer C: 20 mM Tris-acetate

1 mM EDTA

as follows:

old Balb/c mouse and disrupted

60 mM KCI, 15

and 14 mM b-mercaptoethanol.

5 mM EDTA and 5 mM EGTA.

10 mM Mg2+ and 50 ug/ml propidium

Nuclei

RESEARCH COMMUNICATIONS

Buffer A: 15 mM Hepes (pH 7.5) containing

mM NaCl, 0.15 mM spermin, B: buffer A containing

AND BIOPHYSICAL

lo5 nuclei were incubated

24

through

in buffer

the

A at a

hrs).

in a final volume of 10 ul

in the presence of 5 mM Mg2+ and 5 mM Ca2+ at 37°C for 0, 15, 30, 45 and 60 min; the reaction

was stopped by the addition

of 0.5 ml ice-cold buffer C and placing the samples

on ice. In the absence of Ca 2+, Mg2+ was added at a concentration order to keep the same concentration The inhibitory addition

of divalent

cations) in presence

effect of Zn2+ was tested at final concentrations

to the normal

concentrations

of 10 mM Mg2+ (in

of Mg 2+ and Ca2+.

of 5 mM EGTA.

of 0.1, 1 and 10 mM in

Potential

maximal

iodide staining

was assessed by adding 0.1 mglml of bovine pancreatic

to the reaction

mixture

propidium

DNase I (Sigma)

in presence of 5 mM Mg2+ and 5 mM Ca2+, and assayed as the

other samples. Agarose reaction

gel electrophoresis

was stopped

alcohol (50/49/l

of DNA.

by the addition

At the end of the incubation

of three

by volumes) and mixing.

volumes

After centrifugation

After a migration

of 30-60 min at 5 Volts/cm,

the

of phenol/choloform/isoamylat 12000 x g for 5 min, the

samples were loaded onto a 1.8 % agarose gel in TAE buffer containing bromide.

period,

photographs

1 ug/ml ethidium were taken on a HV

transiluminator. Flow incubated Facscan

cytometry.

For assessment

of DNA fragmentation,

at 4OC for 15 min in buffer C containing (Becton

Dickinson).

Fluorescence

scale. 533

isolated

nuclei

50 ug/ml PI prior to analysis

was recorded

and analyzed

were on a

on a linear

Vol.

183,

No.

2, 1992

BIOCHEMICAL

AND

RESULTS Propidium

nuclease

containing

Mg2+

various

was induced

RESEARCH

COMMUNICATIONS

AND DISCUSSION

iodide (PI) staining

endogenous

RIOPHYSICAL

as a measure of DNA degradation.

by incubation

of isolated

thymocyte

and Ca2+ (9) and the extent of DNA degradation

time points by gel electrophoresis

of extracted

Activation nuclei

staining

(Fig.

increased

with

time.

Thus,

This

degradation. correlation

Nuclei

forward

propidium incubated

DNA (Fig. 1A). At the same time

of PI staining

mean fluorescence is supported iodide

degradation

is an index by recent

uptake

1A) and

of the extent

of DNA

demonstrating

nuclease

the

treatment

and DNA degradation,

Again there was a clear relationship

we compared

incubated

with

between intensity

a maximum

mean fluorescence

between

gel electrophoresis

or without

of staining

As expected, DNA cleavage occurred more rapidly

DNase I reaching

DNase

and

I (Fig.

2).

and extent of in the presence of

after 45 minutes.

The subsequent

decline was probably the result of some DNA loss from nuclei, as at later time points some debris were observed on the light scatter (foward scatter versus 90” scatter) plot.

12345

v)

=

Fiaure

1. Propidium iodide staining correlates with the extent of nuclear DNA degradation. 105 thymocyte nuclei were incubated in presence of 5 mM Mg2+ and 5 mM Ca2+ for various periods. Samples were diluted 50-fold in a buffer containing 10 mM Mg2+ and 50 mg/ml propidium iodide and incubated for 10 min on ice before flow cytometry. A) agarose gel analysis of DNA extracted from the samples at times 0,15,30, and 60 min (lanes l-4), and molecular weight markers: 1608, 1212, 619, 587, 517,396, 317,219 and 132 base pairs from top to bottom (lane 5), B) overlap of propidium iodide fluorescence histograms at times 0, 15,30 and 60 min (the numbers correspond to the samples in lanes 1-4 in A). 534

of

and Ca2+ for 0 to 60 min show

To verify the correlation

increased by DNase I.

of

(Fig.

work

and restriction

in the presence of Mg2+

Fats analysis of isolated thymocyte nuclei degradation.

of DNA

Intensity

versus 90” scatter plots.

DNA degradation intensity

to the extent

observation

between

nuclei (10). similar

1B) correlated

in buffer

was assessed at

points, isolated nuclei were stained with PI and analyzed by flow cytometry. PI

of

Vol.

183,

No.

2, 1992

BIOCHEMICAL

8! 8 5 E al E

AND

BIOPHYSICAL

RESEARCH

COMMUNICATIONS

180

160

x 140 E 2 EQ 120 2 0. s @ 100 5 0

40 20 Time (min)

60

Fimre 2, The increase of propidium iodide staining by thymocyte nuclei is accelerated by DNaseI. A) IO5 thymocyte various periods Mean propidium

nuclei iodide

DNA degradation increase in PI staining known

inhibitors

were incubated

in presence

of 5 mM

Mg2+

and 5 mM

in the presence (squares) and absence (circles) of 0.1 mg/ml fluorescences

is inhibited

are plotted

time.

by Zn2+ and EGTA.

in isolated thymocyte

of thymocyte

versus

Zn2+

and EGTA inhibited

nuclei (Fig. 3A). These reagents

endonuclease

activity (9). Gel electrophoresis

prepared

from the same samples showed that DNA degradation

inhibited

(Fig. 3B).

packing which might explain

the inhibitory

values were actually

and nuclease activity appreared

to be totally abrogated

are of DNA

in the presence of 10

mM Zn2+ we observed an increase in 90” scatter (Fig 3C to E) suggesting this case the mean fluorescence

the

had been similarly

In the presence of 1 mM Zn2+, and even more pronounced chromatin

Ca2+ for DNase I.

some change in

action of Zn2+ on the enzyme. reduced (as compared

In

to controls),

(Fig. 3A and B).

CONCLUSION In conclusion

it is widely accepted that intemucleosomal

useful marker for apoptotic here demonstrate nuclei followed Although presumably

that a rapid and simple method of PI staining by FACS analysis allows quantitation

the precise mechanism is related to increased

underlying

populations

at different

of isolated thymocyte

of such DNA degradation.

this phonomenon

accessibility

dye. This method should enable us to quantitate lymphocyte

DNA degradation

is a

cell death in a variety of model systems. The data presented

of degraded endogenous

is not known, it DNA to the intercalating endonulease

stages of their development.

535

levels in

Vol.

183, No. 2, 1992

BIOCHEMICAL

AND BIOPHYSICAL

RESEARCH COMMUNICATIONS

6 12345

E 60-j-----J ii 0 20

40

Time

60

(min)

FSC ( A.U. )

SSC ( A.U. ) Fieure 3. Influence of divalent cations on propidium iodide staining of thymocyte nuclei. A) 105 thymocyte nuclei were incubated in presence of 1) 5 mM Mg2+ and 5 mM Ca2+ (open squares); 2) 5 mM Mg2’, 5 mM Ca2+ and 0.1 mM Zn2+ (closed circles); 3) 5 mM Mg2+, 5 mM Ca2+ and 1 mM Zn2+ (closed circles with dashed line); 4) 5 mM Mg2+, 5 mM Ca2+ and 10 mM Zn2+ (open circles) and finally 5) 10 mM Mg2+ and 5 mM EGTA (closed squares). Samples were treated as stated under Material and Methods. B) After 45 min of incubation, DNA was extracted from all samples and were analysed by agarose gel electrophoresis. Numbers on corresponding data points and gel lanes are identical. FSC versus SSC plot of tbymocyte nuclei in absence (C) and presence (D) of 10 mM Zn2+. E) overlap of the SSC distribution shown in C and D. Some doublets, or nuclei in G2 are present.

ACKNOWLEDGMENTS We thank the Wellcome

P. Zaech Trust

and

C. Knabenhans

and MC.

Peitsch

for cell sorting. was

supported

536

T. Crompton

by the Swiss

was Cancer

supported League.

by

Vol.

183,

No.

2, 1992

BIOCHEMICAL

AND

BIOPHYSICAL

1. Duvall, E. and Wyllie, A. H. (1986) Immunol. Today 2. Shi, Y., Sahai, B. M. and Green, D. R. (1989) Nature 3. MacDonald,

H. R. and Lees, R. K (1990) Nature

4. Smith, C. A., Williams, (1990) Nature

G. T., Kingston,

RESEARCH

COMMUNICATIONS

7, 115-119. 339, 625--626.

343,642-644.

R., Jenkinson,

E. J. and Owen, J. J. T.

38’7,181-184.

5. Wyllie, A. H. (1980) Nature

234,555-556.

6. Cohen, J. J., and Duke, R. C. (1984) J. Immunol. 7. Swat, W., Ignatowicz,

132,38-42.

L., von Boehmer, H. and Risielow,

P. (1991) Nature

351,

Xx-156. 8. Hewish, D. R. and Burgoyne,

L. A. (1973) (1973)

Biochem. Eiophys. Res. Commurz.

52,504510. 9. Vanderbilt,

J. N., Bloom, K. S. and Anderson,

J. N. (1982) J. Bioi. Chem. 257,

13009-13017. 10. Prosperi,

E., Giangare,

C. and Bottiroli,

G. (1991) Cytometry

537

12,323-329.

Propidium iodide staining correlates with the extent of DNA degradation in isolated nuclei.

Gradual degradation of internucleosomal DNA is a hallmark of apoptosis and can be simulated by incubating isolated thymocyte nuclei in the presence of...
577KB Sizes 0 Downloads 0 Views